Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1935 NP_444254 18 1935 NP_444253 18 1935 NP_444255 18 1935 XP_005247551 18 1935 XP_005247550 18 1935 XP_006713712 18 1935 XP_005247549 18 1935 NP_001271132 16 5631 NP_001092095 16 5631 NP_001271131 16 5631 NP_057559 16 5631 NP_001271130 16 5631 NP_001271133 16 5631 XP_006720234 16 5631 NP_001153514 16 7355 NP_060604 16 7355 NP_002378 16 7355 NP_001078846 16 7355 XP_005272048 16 7355 XP_006714680 16 7355 NP_037505 16 7355 NP_733841 15 9605 NP_004671 15 9605 NP_203752 15 9605 NP_001139381 15 9605 NP_079490 15 9605 NP_001137301 15 9605 NP_001003895 15 9605 NP_004816 15 9605 NP_057383 15 9605 XP_006722615 15 9605 XP_005248180 15 9605 XP_006714090 15 9605 XP_005264132 15 9605 XP_006712877 15 9605 XP_006712876 15 9605 XP_006712875 15 9605 XP_006712874 15 9605 XP_006712873 15 9605 XP_006712872 15 9605 XP_005246976 15 9605 XP_005246975 15 9605 NP_056988 15 9605 NP_003206 15 9605 NP_001003894 15 9605 NP_001001722 15 9605>NP_444256 Length = 1794 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 829 RDLLGKKVS 837>NP_444254 Length = 1845 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 829 RDLLGKKVS 837>NP_444253 Length = 1914 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 898 RDLLGKKVS 906>NP_444255 Length = 1863 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 898 RDLLGKKVS 906>XP_005247551 Length = 1855 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 839 RDLLGKKVS 847>XP_005247550 Length = 1856 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 908 RDLLGKKVS 916>XP_006713712 Length = 1923 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 908 RDLLGKKVS 916>XP_005247549 Length = 1924 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KKVS Sbjct: 908 RDLLGKKVS 916>NP_001271132 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 109 RPLLVKKIA 117>NP_001092095 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 166 RPLLVKKIA 174>NP_001271131 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 180 RPLLVKKIA 188>NP_057559 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 172 RPLLVKKIA 180>NP_001271130 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 186 RPLLVKKIA 194>NP_001271133 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 172 RPLLVKKIA 180>XP_006720234 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 R LLVKK++ Sbjct: 186 RPLLVKKIA 194>NP_001153514 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLLVKKVS 9 +LLV+KVS Sbjct: 4 ELLVRKVS 11>NP_060604 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DLLVKKVS 9 +LLV+KVS Sbjct: 4 ELLVRKVS 11>NP_002378 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KK++ Sbjct: 46 RDLLEKKLA 54>NP_001078846 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KK++ Sbjct: 236 RDLLEKKLA 244>XP_005272048 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KK++ Sbjct: 46 RDLLEKKLA 54>XP_006714680 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLLVKKVS 9 RDLL KK++ Sbjct: 197 RDLLEKKLA 205>NP_037505 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RDLLVKKVS 9 R LVKKVS Sbjct: 746 RHTLVKKVS 754>NP_733841 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 284 RDIVVKK 290>NP_004671 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 284 RDIVVKK 290>NP_203752 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 539 RDLLIKE 545>NP_001139381 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 531 RDLLIKE 537>NP_079490 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLLVKKV 8 DLL+KK+ Sbjct: 89 DLLMKKI 95>NP_001137301 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLLVKKV 8 DLL+KK+ Sbjct: 89 DLLMKKI 95>NP_001003895 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 284 RDIVVKK 290>NP_004816 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 285 RDIVVKK 291>NP_057383 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLLVKKV 8 RD+LVK V Sbjct: 397 RDILVKGV 404>XP_006722615 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLLVKKV 8 DLL+KK+ Sbjct: 89 DLLMKKI 95>XP_005248180 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLLVKKV 8 RDL VKK+ Sbjct: 19 RDLWVKKL 26>XP_006714090 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLLVKKV 8 RDL VKK+ Sbjct: 19 RDLWVKKL 26>XP_005264132 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLLVKKVS 9 D+LV K+S Sbjct: 1179 DILVSKIS 1186>XP_006712877 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 355 RDLLIKE 361>XP_006712876 Length = 1783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 461 RDLLIKE 467>XP_006712875 Length = 1826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 504 RDLLIKE 510>XP_006712874 Length = 1836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 514 RDLLIKE 520>XP_006712873 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 539 RDLLIKE 545>XP_006712872 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 539 RDLLIKE 545>XP_005246976 Length = 1864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 542 RDLLIKE 548>XP_005246975 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RDLL+K+ Sbjct: 549 RDLLIKE 555>NP_056988 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLLVKKVS 9 D+LV K+S Sbjct: 1180 DILVSKIS 1187>NP_003206 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLLVKKV 8 RDL VKK+ Sbjct: 99 RDLWVKKL 106>NP_001003894 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 284 RDIVVKK 290>NP_001001722 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLLVKK 7 RD++VKK Sbjct: 285 RDIVVKK 291Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.138 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,683 Number of extensions: 563 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |