Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 21 175 NP_671714 21 175 XP_006715890 21 175 XP_005250160 21 175 XP_005250159 21 175 NP_000932 17 2528 XP_006726591 17 3301 XP_006718462 17 3301 XP_006710008 17 3301 NP_075463 16 5631 NP_569707 16 5631 NP_002831 16 5631 XP_006719812 16 5631 XP_006710864 16 5631 XP_006710861 16 5631 XP_005271138 16 5631 XP_006710860 16 5631 XP_006710859 16 5631 XP_005271137 16 5631 XP_006710858 16 5631 XP_005271136 16 5631 NP_003900 16 7355 NP_002830 16 7355 NP_004790 16 7355 NP_015563 16 7355 NP_056504 16 7355 XP_006716891 16 7355 XP_006716890 16 7355 XP_006716889 16 7355 XP_006716888 16 7355 XP_006716887 16 7355 XP_006716886 16 7355 XP_006716885 16 7355 XP_006716884 16 7355 XP_006716883 16 7355 XP_006716882 16 7355 XP_006716881 16 7355 XP_006716880 16 7355 XP_006716879 16 7355 XP_006716878 16 7355 XP_006716877 16 7355 XP_006716876 16 7355 XP_005251150 16 7355 XP_005250036 16 7355 XP_005250035 16 7355 XP_005250034 16 7355 XP_005250033 16 7355 NP_115820 15 9605 NP_001157262 15 9605 NP_005147 15 9605 NP_003624 15 9605 NP_001243503 15 9605 NP_001243505 15 9605 NP_001243504 15 9605 XP_005265324 15 9605>NP_005742 Length = 3907 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDGVITQLT 9 RDG+ITQLT Sbjct: 203 RDGIITQLT 211>NP_671714 Length = 3899 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDGVITQLT 9 RDG+ITQLT Sbjct: 203 RDGIITQLT 211>XP_006715890 Length = 3860 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDGVITQLT 9 RDG+ITQLT Sbjct: 203 RDGIITQLT 211>XP_005250160 Length = 3939 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDGVITQLT 9 RDG+ITQLT Sbjct: 203 RDGIITQLT 211>XP_005250159 Length = 3952 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDGVITQLT 9 RDG+ITQLT Sbjct: 203 RDGIITQLT 211>NP_000932 Length = 680 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDGVITQL 8 RDG +TQL Sbjct: 587 RDGALTQL 594>XP_006726591 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV+ QLT Sbjct: 77 DGVVIQLT 84>XP_006718462 Length = 4966 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV+ QLT Sbjct: 141 DGVVIQLT 148>XP_006710008 Length = 2014 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV+ QLT Sbjct: 141 DGVVIQLT 148>NP_075463 Length = 3013 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RDGVIT 6 RDGVIT Sbjct: 2809 RDGVIT 2814>NP_569707 Length = 1898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 635 RNGVITQ 641>NP_002831 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 635 RNGVITQ 641>XP_006719812 Length = 3019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RDGVIT 6 RDGVIT Sbjct: 2809 RDGVIT 2814>XP_006710864 Length = 1729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>XP_006710861 Length = 1902 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>XP_005271138 Length = 1909 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 635 RNGVITQ 641>XP_006710860 Length = 1911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>XP_006710859 Length = 1913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>XP_005271137 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 635 RNGVITQ 641>XP_006710858 Length = 1922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>XP_005271136 Length = 1922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RDGVITQ 7 R+GVITQ Sbjct: 639 RNGVITQ 645>NP_003900 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGVIT L Sbjct: 428 DGVITDL 434>NP_002830 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>NP_004790 Length = 1425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV+ Q+T Sbjct: 1224 DGVMVQIT 1231>NP_015563 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV+ Q+T Sbjct: 1165 DGVMVQIT 1172>NP_056504 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV TQ+T Sbjct: 86 DGVRTQVT 93>XP_006716891 Length = 1882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 897 RNGIITKYT 905>XP_006716890 Length = 1893 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 925 RNGIITKYT 933>XP_006716889 Length = 1899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 934 RNGIITKYT 942>XP_006716888 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716887 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716886 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716885 Length = 1918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716884 Length = 1922 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 938 RNGIITKYT 946>XP_006716883 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 938 RNGIITKYT 946>XP_006716882 Length = 1927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716881 Length = 1928 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 943 RNGIITKYT 951>XP_006716880 Length = 1929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716879 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716878 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716877 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_006716876 Length = 1932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RDGVITQLT 9 R+G+IT+ T Sbjct: 947 RNGIITKYT 955>XP_005251150 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGVIT L Sbjct: 428 DGVITDL 434>XP_005250036 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV TQ+T Sbjct: 86 DGVRTQVT 93>XP_005250035 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV TQ+T Sbjct: 86 DGVRTQVT 93>XP_005250034 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV TQ+T Sbjct: 86 DGVRTQVT 93>XP_005250033 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DGVITQLT 9 DGV TQ+T Sbjct: 86 DGVRTQVT 93>NP_115820 Length = 1834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DGVITQ 7 DGV+TQ Sbjct: 731 DGVLTQ 736>NP_001157262 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 2 DGVVTDL 8>NP_005147 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 2 DGVVTDL 8>NP_003624 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 280 DGVVTSL 286>NP_001243503 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 280 DGVVTSL 286>NP_001243505 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 207 DGVVTSL 213>NP_001243504 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DGVITQL 8 DGV+T L Sbjct: 280 DGVVTSL 286>XP_005265324 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDGVITQ 7 RDG +TQ Sbjct: 531 RDGPVTQ 537Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.140 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,131 Number of extensions: 774 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |