Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 18 1482 NP_005913 18 1482 XP_005267046 18 1482 XP_005267045 18 1482 NP_001035351 18 1935 NP_001035350 18 1935 XP_005262843 18 1935 XP_005262842 18 1935 NP_001946 17 4312 NP_001161791 17 4312 NP_733793 17 4312 NP_004832 17 4312 NP_001181966 17 4312 NP_001071174 17 4312 NP_038475 17 4312 NP_001257981 17 4312 XP_005259943 17 4312 XP_005259942 17 4312 XP_005259941 17 4312 XP_006715535 17 4312 XP_005245679 17 4312 XP_005245678 17 4312 XP_005245677 17 4312 XP_006711697 17 4312 NP_003416 16 5631 NP_002937 16 5631 XP_005246719 16 5631 XP_005246718 16 5631 XP_005246022 16 5631 NP_060556 16 5631 NP_056467 16 7355 NP_789789 16 7355 NP_002323 15 9605 NP_443728 15 9605 NP_001257545 15 9605 NP_002754 15 9605 NP_510880 15 9605 NP_005831 15 9605 NP_976063 15 9605 XP_005274857 15 9605 XP_005274700 15 9605 XP_005274699 15 9605 XP_006713550 15 9605 XP_006711518 15 9605 XP_005273252 15 9605 XP_005273253 15 9605 XP_005273251 15 9605>NP_006715 Length = 1558 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCTASQLLD 9 R TASQLLD Sbjct: 1539 RWTASQLLD 1547>NP_005913 Length = 1608 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCTASQLLD 9 R TASQLLD Sbjct: 1589 RWTASQLLD 1597>XP_005267046 Length = 1554 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCTASQLLD 9 R TASQLLD Sbjct: 1535 RWTASQLLD 1543>XP_005267045 Length = 1604 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCTASQLLD 9 R TASQLLD Sbjct: 1585 RWTASQLLD 1593>NP_001035351 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RCTASQLL 8 RCTA Q+L Sbjct: 656 RCTAGQIL 663>NP_001035350 Length = 766 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RCTASQLL 8 RCTA Q+L Sbjct: 639 RCTAGQIL 646>XP_005262843 Length = 765 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RCTASQLL 8 RCTA Q+L Sbjct: 638 RCTAGQIL 645>XP_005262842 Length = 782 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RCTASQLL 8 RCTA Q+L Sbjct: 655 RCTAGQIL 662>NP_001946 Length = 212 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASQLLD 9 RC+ S L+D Sbjct: 52 RCSCSSLMD 60>NP_001161791 Length = 211 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASQLLD 9 RC+ S L+D Sbjct: 51 RCSCSSLMD 59>NP_733793 Length = 1280 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 562 KCSSSELID 570>NP_004832 Length = 1139 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 414 KCSSSELID 422>NP_001181966 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RCT SQL Sbjct: 53 RCTKSQL 59>NP_001071174 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RCT SQL Sbjct: 53 RCTKSQL 59>NP_038475 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 328 CVASHLLD 335>NP_001257981 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 328 CVASHLLD 335>XP_005259943 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 67 CVASHLLD 74>XP_005259942 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 397 CVASHLLD 404>XP_005259941 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 397 CVASHLLD 404>XP_006715535 Length = 946 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RCT SQL Sbjct: 53 RCTKSQL 59>XP_005245679 Length = 1142 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 414 KCSSSELID 422>XP_005245678 Length = 1145 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 417 KCSSSELID 425>XP_005245677 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 445 KCSSSELID 453>XP_006711697 Length = 1179 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RCTASQLLD 9 +C++S+L+D Sbjct: 454 KCSSSELID 462>NP_003416 Length = 682 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C AS LLD Sbjct: 398 CRASNLLD 405>NP_002937 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CTASQLL 8 CT SQLL Sbjct: 49 CTISQLL 55>XP_005246719 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RC ASQL Sbjct: 526 RCIASQL 532>XP_005246718 Length = 785 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RC ASQL Sbjct: 563 RCIASQL 569>XP_005246022 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CTASQLL 8 CT SQLL Sbjct: 57 CTISQLL 63>NP_060556 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RCTASQL 7 RC ASQL Sbjct: 537 RCIASQL 543>NP_056467 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RCTASQLLD 9 RC SQL D Sbjct: 505 RCLRSQLSD 513>NP_789789 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASQLLD 9 RC + +LLD Sbjct: 174 RCPSQRLLD 182>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTASQLL 8 CTASQ + Sbjct: 3334 CTASQFV 3340>NP_443728 Length = 2145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASQLLD 9 RC S++LD Sbjct: 543 RCGESEVLD 551>NP_001257545 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621>NP_002754 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621>NP_510880 Length = 2054 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TASQLLD 9 +ASQLLD Sbjct: 1307 SASQLLD 1313>NP_005831 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C+A LLD Sbjct: 176 CSAESLLD 183>NP_976063 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TASQLLD 9 +ASQLLD Sbjct: 1307 SASQLLD 1313>XP_005274857 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C+A LLD Sbjct: 176 CSAESLLD 183>XP_005274700 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C+A LLD Sbjct: 176 CSAESLLD 183>XP_005274699 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTASQLLD 9 C+A LLD Sbjct: 176 CSAESLLD 183>XP_006713550 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCTASQLLD 9 RC S++LD Sbjct: 543 RCGESEVLD 551>XP_006711518 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273252 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273253 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621>XP_005273251 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RCTASQLL 8 RC SQL+ Sbjct: 614 RCITSQLI 621Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.129 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 434,319 Number of extensions: 508 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |