Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003310 19 869 NP_597676 19 869 NP_001243779 19 869 NP_596869 19 869 XP_005246888 19 869 XP_006712788 19 869 XP_006712787 19 869 XP_006712786 19 869 NP_001254479 19 869 NP_597681 19 869 NP_004963 18 1482 NP_733841 18 1482 NP_004671 18 1482 NP_001003895 18 1482 NP_004816 18 1482 XP_005251512 18 1482 NP_001003894 18 1482 NP_001001722 18 1482 NP_001243489 17 4312 NP_004935 17 4312 NP_031392 16 7355 NP_001007268 16 7355 NP_001182570 16 7355 NP_001167560 16 7355 NP_114423 16 7355 NP_001167561 16 7355 XP_005260914 16 7355 XP_005260913 16 7355 XP_005246450 16 7355 XP_005246449 16 7355 NP_001120674 15 9605 NP_001245142 15 9605 NP_001120675 15 9605 NP_060856 15 9605 NP_001245141 15 9605 NP_003015 15 9605 NP_006018 15 9605 NP_569082 15 9605 NP_003677 15 9605 XP_005261083 15 9605 XP_006720039 15 9605 XP_005268381 15 9605 XP_005270035 15 9605 XP_005263618 15 9605 XP_005263614 15 9605 XP_005263613 15 9605 XP_005263612 15 9605 XP_005263609 15 9605 XP_005263607 15 9605 XP_005273407 15 9605 XP_006711903 15 9605 NP_942090 15 9605>NP_003310 Length = 26926 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 6843 RCNMKLVPE 6851>NP_597676 Length = 27051 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 6968 RCNMKLVPE 6976>NP_001243779 Length = 34350 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 14267 RCNMKLVPE 14275>NP_596869 Length = 33423 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 13340 RCNMKLVPE 13348>XP_005246888 Length = 22663 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 2580 RCNMKLVPE 2588>XP_006712788 Length = 24022 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 3939 RCNMKLVPE 3947>XP_006712787 Length = 33978 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 13895 RCNMKLVPE 13903>XP_006712786 Length = 35484 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 15401 RCNMKLVPE 15409>NP_001254479 Length = 35991 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 15908 RCNMKLVPE 15916>NP_597681 Length = 27118 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL+ E Sbjct: 7035 RCNMKLVPE 7043>NP_004963 Length = 1132 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 R NLKLIME Sbjct: 922 RRNLKLIME 930>NP_733841 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 498 RCNIKLELE 506>NP_004671 Length = 554 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 498 RCNIKLELE 506>NP_001003895 Length = 554 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 498 RCNIKLELE 506>NP_004816 Length = 541 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 499 RCNIKLELE 507>XP_005251512 Length = 1132 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 R NLKLIME Sbjct: 922 RRNLKLIME 930>NP_001003894 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 498 RCNIKLELE 506>NP_001001722 Length = 541 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RCN+KL +E Sbjct: 499 RCNIKLELE 507>NP_001243489 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RC++ L+ME Sbjct: 51 RCDIILVME 59>NP_004935 Length = 305 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RC++ L+ME Sbjct: 51 RCDIILVME 59>NP_031392 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCNLKLI 7 RCN K+I Sbjct: 116 RCNRKMI 122>NP_001007268 Length = 1324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCNLKLI 7 RCN K+I Sbjct: 116 RCNRKMI 122>NP_001182570 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCNLKLI 7 RCN K+I Sbjct: 116 RCNRKMI 122>NP_001167560 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CNLKLIM 8 CNL L+M Sbjct: 154 CNLDLLM 160>NP_114423 Length = 891 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CNLKLIM 8 CNL L+M Sbjct: 170 CNLDLLM 176>NP_001167561 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CNLKLIM 8 CNL L+M Sbjct: 197 CNLDLLM 203>XP_005260914 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CNLKLIM 8 CNL L+M Sbjct: 135 CNLDLLM 141>XP_005260913 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CNLKLIM 8 CNL L+M Sbjct: 315 CNLDLLM 321>XP_005246450 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCNLKLI 7 RCN K+I Sbjct: 116 RCNRKMI 122>XP_005246449 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RCNLKLI 7 RCN K+I Sbjct: 116 RCNRKMI 122>NP_001120674 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 307 RCGIFLILE 315>NP_001245142 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 305 RCGIFLILE 313>NP_001120675 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 307 RCGIFLILE 315>NP_060856 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 307 RCGIFLILE 315>NP_001245141 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 361 RCGIFLILE 369>NP_003015 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 1291 CNIKLL 1296>NP_006018 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 707 CNIKLL 712>NP_569082 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 707 CNIKLL 712>NP_003677 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 707 CNIKLL 712>XP_005261083 Length = 1716 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 1286 CNIKLL 1291>XP_006720039 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 140 RCGIFLILE 148>XP_005268381 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RCNLKLIME 9 RC + LI+E Sbjct: 305 RCGIFLILE 313>XP_005270035 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RC+L+ +ME Sbjct: 1054 RCSLEGLME 1062>XP_005263618 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 134 CNYMLILE 141>XP_005263614 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 194 CNYMLILE 201>XP_005263613 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 194 CNYMLILE 201>XP_005263612 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 198 CNYMLILE 205>XP_005263609 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 228 CNYMLILE 235>XP_005263607 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CNLKLIME 9 CN LI+E Sbjct: 288 CNYMLILE 295>XP_005273407 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 706 CNIKLL 711>XP_006711903 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CNLKLI 7 CN+KL+ Sbjct: 707 CNIKLL 712>NP_942090 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RCNLKLIME 9 RC+L+ +ME Sbjct: 1054 RCSLEGLME 1062Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.145 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 490,786 Number of extensions: 621 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |