Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001728 18 1482 NP_689648 17 3301 NP_940968 17 4312 NP_060101 17 4312 XP_006714536 17 4312 NP_006715 16 5631 NP_005913 16 5631 NP_078907 16 5631 XP_005271733 16 5631 XP_006718971 16 5631 XP_006718969 16 5631 XP_006718968 16 5631 XP_005271730 16 5631 XP_005267046 16 5631 XP_005267045 16 5631 NP_057308 16 7355 NP_694540 16 7355 NP_789790 16 7355 NP_001265552 16 7355 NP_001265553 16 7355 XP_005258905 16 7355 XP_005267072 16 7355 NP_899200 15 9605 NP_003289 15 9605 NP_005531 15 9605 NP_079421 15 9605 NP_001186571 15 9605 NP_112489 15 9605 NP_689966 15 9605 XP_006718069 15 9605 XP_005270233 15 9605 XP_005270232 15 9605 XP_005270230 15 9605 XP_005270229 15 9605 XP_005270228 15 9605 XP_005249005 15 9605 XP_005249004 15 9605 XP_005249003 15 9605 XP_005249000 15 9605 XP_006713547 15 9605 XP_006713546 15 9605 XP_005247135 15 9605 XP_005247134 15 9605 XP_006713383 15 9605 XP_005265485 15 9605 XP_005270894 15 9605 XP_006710684 15 9605 XP_005270892 15 9605 XP_005270890 15 9605 XP_006710665 15 9605 NP_848643 15 9605>NP_001728 Length = 559 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RCIKMRM 7 RCIKMR+ Sbjct: 111 RCIKMRL 117>NP_689648 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CIKMRMEM 9 C+ MRM M Sbjct: 352 CVNMRMSM 359>NP_940968 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+KMR+ + Sbjct: 420 CVKMRLSL 427>NP_060101 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 CIKMRMEM 9 C+K+++EM Sbjct: 634 CVKLQVEM 641>XP_006714536 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+KMR+ + Sbjct: 306 CVKMRLSL 313>NP_006715 Length = 1558 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CIKMRME 8 C+K+R+E Sbjct: 630 CLKLRLE 636>NP_005913 Length = 1608 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CIKMRME 8 C+K+R+E Sbjct: 630 CLKLRLE 636>NP_078907 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 332 RCLELHMEI 340>XP_005271733 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 154 RCLELHMEI 162>XP_006718971 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 154 RCLELHMEI 162>XP_006718969 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 154 RCLELHMEI 162>XP_006718968 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 154 RCLELHMEI 162>XP_005271730 Length = 648 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 RC+++ ME+ Sbjct: 473 RCLELHMEI 481>XP_005267046 Length = 1554 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CIKMRME 8 C+K+R+E Sbjct: 630 CLKLRLE 636>XP_005267045 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 CIKMRME 8 C+K+R+E Sbjct: 630 CLKLRLE 636>NP_057308 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IKMRME 8 IKMRME Sbjct: 324 IKMRME 329>NP_694540 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RCIKMR 6 +C+KMR Sbjct: 469 KCVKMR 474>NP_789790 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C+K R+E Sbjct: 346 CVKQRLE 352>NP_001265552 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RCIKMR 6 +C+KMR Sbjct: 469 KCVKMR 474>NP_001265553 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RCIKMR 6 +C+KMR Sbjct: 469 KCVKMR 474>XP_005258905 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C+K R+E Sbjct: 255 CVKQRLE 261>XP_005267072 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IKMRME 8 IKMRME Sbjct: 317 IKMRME 322>NP_899200 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 537 CVEMGMDM 544>NP_003289 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 +C++M M+M Sbjct: 195 KCLEMGMKM 203>NP_005531 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RCIKMRMEM 9 RC ++ +EM Sbjct: 148 RCAELELEM 156>NP_079421 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 934 CLKLRKEI 941>NP_001186571 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 187 CVEMGMDM 194>NP_112489 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C+K RM+ Sbjct: 95 CVKTRMQ 101>NP_689966 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C++ RME Sbjct: 571 CLRQRME 577>XP_006718069 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C+K RM+ Sbjct: 95 CVKTRMQ 101>XP_005270233 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 196 CLKLRKEI 203>XP_005270232 Length = 1535 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 935 CLKLRKEI 942>XP_005270230 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 896 CLKLRKEI 903>XP_005270229 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 935 CLKLRKEI 942>XP_005270228 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C+K+R E+ Sbjct: 935 CLKLRKEI 942>XP_005249005 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C++ RME Sbjct: 109 CLRQRME 115>XP_005249004 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C++ RME Sbjct: 587 CLRQRME 593>XP_005249003 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C++ RME Sbjct: 565 CLRQRME 571>XP_005249000 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CIKMRME 8 C++ RME Sbjct: 587 CLRQRME 593>XP_006713547 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 96 CVEMGMDM 103>XP_006713546 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 170 CVEMGMDM 177>XP_005247135 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 187 CVEMGMDM 194>XP_005247134 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CIKMRMEM 9 C++M M+M Sbjct: 537 CVEMGMDM 544>XP_006713383 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 +C++M M+M Sbjct: 195 KCLEMGMKM 203>XP_005265485 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RCIKMRMEM 9 +C++M M+M Sbjct: 176 KCLEMGMKM 184>XP_005270894 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RCIKMRMEM 9 RC ++ +EM Sbjct: 148 RCAELELEM 156>XP_006710684 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RCIKMRMEM 9 RC ++ +EM Sbjct: 29 RCAELELEM 37>XP_005270892 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RCIKMRMEM 9 RC ++ +EM Sbjct: 148 RCAELELEM 156>XP_005270890 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RCIKMRMEM 9 RC ++ +EM Sbjct: 146 RCAELELEM 154>XP_006710665 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RCIKMRME 8 RC++ R+E Sbjct: 307 RCLRERLE 314>NP_848643 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RCIKMRME 8 RC++ R+E Sbjct: 270 RCLRERLE 277Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.351 0.140 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 475,930 Number of extensions: 622 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |