Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_001166902 17 4312 NP_056126 17 4312 NP_001166879 17 4312 NP_065883 17 4312 NP_056261 17 4312 XP_005246484 17 4312 XP_005246482 17 4312 XP_005246481 17 4312 XP_006712450 17 4312 XP_005246480 17 4312 XP_006712449 17 4312 XP_005246478 17 4312 XP_006711822 17 4312 XP_006711821 17 4312 XP_005245423 17 4312 XP_005245425 17 4312 NP_079040 16 5631 NP_114437 16 7355 NP_068767 16 7355 NP_775960 16 7355 NP_055386 16 7355 XP_005251991 16 7355 XP_005270802 16 7355 NP_940819 16 7355 NP_001243643 15 9605 NP_001164434 15 9605 NP_001171562 15 9605 NP_005495 15 9605 NP_001171564 15 9605 NP_001171565 15 9605 NP_001171563 15 9605 NP_001191433 15 9605 NP_821077 15 9605 NP_001191435 15 9605 NP_001191434 15 9605 NP_690874 15 9605 NP_006217 15 9605 NP_001271254 15 9605 NP_001181 15 9605 NP_001158245 15 9605 NP_991402 15 9605 XP_005266328 15 9605 XP_005253517 15 9605 XP_005246701 15 9605 XP_005246700 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 918 AVVLPGVS 925>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 918 AVVLPGVS 925>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 AVVLPGVS Sbjct: 919 AVVLPGVS 926>NP_001166902 Length = 1543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>NP_056126 Length = 1896 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>NP_001166879 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>NP_065883 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 422 KAVVLPG 428>NP_056261 Length = 2275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 127 KAVVLPG 133>XP_005246484 Length = 1359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_005246482 Length = 1724 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_005246481 Length = 1804 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_006712450 Length = 1816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_005246480 Length = 1816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_006712449 Length = 1908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_005246478 Length = 1908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVVLPGVS 9 A+VLPGV+ Sbjct: 481 ALVLPGVT 488>XP_006711822 Length = 2266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 118 KAVVLPG 124>XP_006711821 Length = 2301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 153 KAVVLPG 159>XP_005245423 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 431 KAVVLPG 437>XP_005245425 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RAVVLPG 7 +AVVLPG Sbjct: 484 KAVVLPG 490>NP_079040 Length = 1116 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVVLPGVS 9 + VVLPG S Sbjct: 656 KTVVLPGYS 664>NP_114437 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AVVLPGVS 9 A LPGVS Sbjct: 521 AAALPGVS 528>NP_068767 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVVLPGVS 9 RAV+ PG S Sbjct: 512 RAVLQPGAS 520>NP_775960 Length = 1285 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVVLPG 7 AVVLPG Sbjct: 714 AVVLPG 719>NP_055386 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VLPGVS 9 VLPGVS Sbjct: 203 VLPGVS 208>XP_005251991 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVVLPG 7 AVVLPG Sbjct: 382 AVVLPG 387>XP_005270802 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VLPGVS 9 VLPGVS Sbjct: 175 VLPGVS 180>NP_940819 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAVVLPGVS 9 RAV+ PG S Sbjct: 512 RAVLQPGAS 520>NP_001243643 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AVVLPG 7 AV+LPG Sbjct: 92 AVILPG 97>NP_001164434 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AVVLPGV 8 A+V+PG+ Sbjct: 233 AIVVPGI 239>NP_001171562 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 247 IILPGVT 253>NP_005495 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 284 IILPGVT 290>NP_001171564 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 296 IILPGVT 302>NP_001171565 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 283 IILPGVT 289>NP_001171563 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 223 IILPGVT 229>NP_001191433 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 568 APVLPGLS 575>NP_821077 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 568 APVLPGLS 575>NP_001191435 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 432 APVLPGLS 439>NP_001191434 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 432 APVLPGLS 439>NP_690874 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 568 APVLPGLS 575>NP_006217 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLPGVS 9 +LPGVS Sbjct: 714 ILPGVS 719>NP_001271254 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVLPGV 8 V+LPGV Sbjct: 251 VILPGV 256>NP_001181 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVLPGV 8 V+LPGV Sbjct: 291 VILPGV 296>NP_001158245 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VVLPGV 8 V+LPGV Sbjct: 199 VILPGV 204>NP_991402 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AVVLPGV 8 A+V+PG+ Sbjct: 233 AIVVPGI 239>XP_005266328 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLPGVS 9 A VLPG+S Sbjct: 323 APVLPGLS 330>XP_005253517 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VVLPGVS 9 ++LPGV+ Sbjct: 283 IILPGVT 289>XP_005246701 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLPGVS 9 +LPGVS Sbjct: 635 ILPGVS 640>XP_005246700 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLPGVS 9 +LPGVS Sbjct: 640 ILPGVS 645Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.140 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 725,775 Number of extensions: 758 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |