Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 21 229 NP_002871 21 229 XP_005250103 21 229 XP_005250102 21 229 XP_005265416 21 229 XP_005265415 21 229 XP_005265414 21 229 XP_005265412 21 229 NP_001243125 20 509 NP_001645 20 509 XP_006724592 20 509 NP_065805 17 3301 XP_005247728 17 3301 XP_006713777 17 3301 NP_212133 16 5631 NP_065831 16 5631 NP_940938 16 5631 NP_001138888 16 5631 XP_006725456 16 5631 XP_006723040 16 5631 XP_005259958 16 5631 XP_005259957 16 5631 XP_005259959 16 5631 XP_005259956 16 5631 XP_005259955 16 5631 NP_056078 16 7355 NP_005152 16 7355 NP_001167587 16 7355 NP_057038 16 7355 NP_065868 16 7355 NP_932348 16 7355 XP_005256402 16 7355 XP_006722342 16 7355 XP_005254315 16 7355 XP_005254314 16 7355 XP_006720509 16 7355 XP_005254313 16 7355 XP_005254312 16 7355 XP_006719146 16 7355 XP_005247737 16 7355 XP_006713778 16 7355 NP_940686 16 7355 NP_060649 15 9605 NP_001273443 15 9605 NP_851997 15 9605 NP_001097 15 9605 XP_006726401 15 9605 XP_006719172 15 9605 XP_006719171 15 9605 XP_005253481 15 9605 XP_005265640 15 9605 XP_006711152 15 9605>NP_004324 Length = 766 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 598 ATVKSRWS 605>NP_002871 Length = 648 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 490 ATVKSRWS 497>XP_005250103 Length = 758 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 598 ATVKSRWS 605>XP_005250102 Length = 767 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 598 ATVKSRWS 605>XP_005265416 Length = 534 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 376 ATVKSRWS 383>XP_005265415 Length = 567 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 409 ATVKSRWS 416>XP_005265414 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 457 ATVKSRWS 464>XP_005265412 Length = 648 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVKSRWS Sbjct: 490 ATVKSRWS 497>NP_001243125 Length = 609 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVK+RWS Sbjct: 454 ATVKTRWS 461>NP_001645 Length = 606 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVK+RWS Sbjct: 451 ATVKTRWS 458>XP_006724592 Length = 611 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ATVKSRWS 9 ATVK+RWS Sbjct: 456 ATVKTRWS 463>NP_065805 Length = 1444 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RATVKSRWS 9 + TVKS+W+ Sbjct: 958 KPTVKSQWT 966>XP_005247728 Length = 1413 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RATVKSRWS 9 + TVKS+W+ Sbjct: 927 KPTVKSQWT 935>XP_006713777 Length = 1424 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RATVKSRWS 9 + TVKS+W+ Sbjct: 938 KPTVKSQWT 946>NP_212133 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>NP_065831 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 + VKSRW Sbjct: 724 SAVKSRW 730>NP_940938 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>NP_001138888 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>XP_006725456 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RATVKSRWS 9 R+T K WS Sbjct: 196 RSTTKQMWS 204>XP_006723040 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RATVKSRWS 9 R+T K WS Sbjct: 196 RSTTKQMWS 204>XP_005259958 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>XP_005259957 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>XP_005259959 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>XP_005259956 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>XP_005259955 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV +RW Sbjct: 99 ATVNARW 105>NP_056078 Length = 3036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>NP_005152 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ATVKSRWS 9 ATV S W+ Sbjct: 189 ATVSSEWA 196>NP_001167587 Length = 3037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>NP_057038 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 RATVKSRW 8 R TVK W Sbjct: 35 RRTVKKEW 42>NP_065868 Length = 936 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RATVKSRW 8 R TVK+ W Sbjct: 264 RRTVKAAW 271>NP_932348 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 357 STVKSAW 363>XP_005256402 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 357 STVKSAW 363>XP_006722342 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 368 STVKSAW 374>XP_005254315 Length = 2576 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254314 Length = 2605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_006720509 Length = 2646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254313 Length = 3057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254312 Length = 3058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_006719146 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 RATVKSRW 8 R TVK W Sbjct: 35 RRTVKKEW 42>XP_005247737 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RATVKSRW 8 R TVK+ W Sbjct: 242 RRTVKAAW 249>XP_006713778 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RATVKSRW 8 R TVK+ W Sbjct: 251 RRTVKAAW 258>NP_940686 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 126 VKSRW 130>NP_060649 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>NP_001273443 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1206 ATVPSQW 1212>NP_851997 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1215 ATVPSQW 1221>NP_001097 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 5/8 (62%) Query: 1 RATVKSRW 8 R T+K W Sbjct: 437 RPTIKDHW 444>XP_006726401 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 RATVKSRW 8 +AT+K W Sbjct: 145 KATLKEEW 152>XP_006719172 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>XP_006719171 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>XP_005253481 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1214 ATVPSQW 1220>XP_005265640 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 5/8 (62%) Query: 1 RATVKSRW 8 R T+K W Sbjct: 458 RPTIKDHW 465>XP_006711152 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 RATVKSRW 8 +AT+K W Sbjct: 145 KATLKEEW 152Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.112 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,736 Number of extensions: 521 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |