Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1482 NP_478126 18 1482 NP_998818 17 3301 XP_005272989 17 3301 NP_001274448 17 4312 NP_001274449 17 4312 NP_068659 17 4312 NP_068658 17 4312 NP_004349 17 4312 NP_001274447 17 4312 NP_001274453 17 4312 NP_001274445 17 4312 NP_001274451 17 4312 NP_001274446 17 4312 NP_001693 17 4312 XP_005251072 17 4312 NP_059127 16 5631 NP_001035186 16 5631 NP_001265546 16 5631 NP_001265545 16 5631 NP_004327 16 5631 NP_001035188 16 5631 XP_005250588 16 5631 XP_005250586 16 5631 XP_005250587 16 5631 NP_001035187 16 5631 NP_076438 16 5631 NP_848604 16 7355 NP_078934 16 7355 NP_001116108 16 7355 NP_068580 16 7355 NP_004409 16 7355 XP_003960325 16 7355 XP_005257244 16 7355 XP_003119208 16 7355 XP_003119825 16 7355 NP_006209 15 9605 NP_001092740 15 9605 NP_001161814 15 9605 NP_001259017 15 9605 NP_071924 15 9605 NP_001004125 15 9605 NP_001259016 15 9605 NP_056380 15 9605 NP_055746 15 9605 NP_036298 15 9605 NP_001161811 15 9605 NP_689787 15 9605 NP_001161813 15 9605 NP_001161812 15 9605 NP_005062 15 9605 XP_006724050 15 9605 XP_006723153 15 9605 XP_005258727 15 9605 XP_005258726 15 9605 XP_006722907 15 9605 XP_006722906 15 9605 XP_006722905 15 9605 XP_005252046 15 9605 XP_006716817 15 9605 XP_005251496 15 9605 XP_006713721 15 9605>NP_004251 Length = 1208 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RALRSRLL 8 RALRSRLL Sbjct: 367 RALRSRLL 374>NP_478126 Length = 272 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR RLLC Sbjct: 91 ALRGRLLC 98>NP_998818 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 RALRS LC Sbjct: 81 RALRSYALC 89>XP_005272989 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 RALRS LC Sbjct: 81 RALRSYALC 89>NP_001274448 Length = 468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 257 RVLRSKSLC 265>NP_001274449 Length = 468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 257 RVLRSKSLC 265>NP_068659 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 369 RVLRSKSLC 377>NP_068658 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 328 RVLRSKSLC 336>NP_004349 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 355 RVLRSKSLC 363>NP_001274447 Length = 489 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 278 RVLRSKSLC 286>NP_001274453 Length = 388 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 177 RVLRSKSLC 185>NP_001274445 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 305 RVLRSKSLC 313>NP_001274451 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 216 RVLRSKSLC 224>NP_001274446 Length = 502 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R LRS+ LC Sbjct: 291 RVLRSKSLC 299>NP_001693 Length = 1584 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR+R LC Sbjct: 916 ALRTRCLC 923>XP_005251072 Length = 1586 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR+R LC Sbjct: 913 ALRTRCLC 920>NP_059127 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR R LC Sbjct: 420 ALRQRTLC 427>NP_001035186 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>NP_001265546 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALRSRLL 8 RALR+RL+ Sbjct: 1010 RALRNRLI 1017>NP_001265545 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALRSRLL 8 RALR+RL+ Sbjct: 1047 RALRNRLI 1054>NP_004327 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALRSRLL 8 RALR+RL+ Sbjct: 1067 RALRNRLI 1074>NP_001035188 Length = 225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>XP_005250588 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>XP_005250586 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>XP_005250587 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>NP_001035187 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>NP_076438 Length = 235 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR R+LC Sbjct: 64 ALRFRVLC 71>NP_848604 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALRSR+ Sbjct: 347 RALRSRI 353>NP_078934 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 A+R R+LC Sbjct: 262 AIRIRILC 269>NP_001116108 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 435 ALRQRLKC 442>NP_068580 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 69 ALRQRLKC 76>NP_004409 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALRSRLL 8 RALR+RL+ Sbjct: 74 RALRTRLV 81>XP_003960325 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALRS+L C Sbjct: 20 ALRSQLRC 27>XP_005257244 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALRSR+ Sbjct: 349 RALRSRI 355>XP_003119208 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALRS+L C Sbjct: 20 ALRSQLRC 27>XP_003119825 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALRS+L C Sbjct: 20 ALRSQLRC 27>NP_006209 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR ++LC Sbjct: 333 ALRIKILC 340>NP_001092740 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 +ALRSRL Sbjct: 188 KALRSRL 194>NP_001161814 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R++RS L C Sbjct: 181 RSMRSALCC 189>NP_001259017 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>NP_071924 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RALRSRLLC 9 RALR L C Sbjct: 435 RALRKSLKC 443>NP_001004125 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 155 RALRARL 161>NP_001259016 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>NP_056380 Length = 1812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 A RSR LC Sbjct: 21 AARSRKLC 28>NP_055746 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 319 ALRPRLSC 326>NP_036298 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRSRLLC 9 LRS L+C Sbjct: 614 LRSNLIC 620>NP_001161811 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R++RS L C Sbjct: 344 RSMRSALCC 352>NP_689787 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R++RS L C Sbjct: 346 RSMRSALCC 354>NP_001161813 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R++RS L C Sbjct: 277 RSMRSALCC 285>NP_001161812 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RALRSRLLC 9 R++RS L C Sbjct: 346 RSMRSALCC 354>NP_005062 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>XP_006724050 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 A RSR LC Sbjct: 21 AARSRKLC 28>XP_006723153 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 192 ALRPRLSC 199>XP_005258727 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 319 ALRPRLSC 326>XP_005258726 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 ALRSRLLC 9 ALR RL C Sbjct: 319 ALRPRLSC 326>XP_006722907 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>XP_006722906 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>XP_006722905 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 RALR+RL Sbjct: 33 RALRTRL 39>XP_005252046 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RALRSRL 7 +ALRSRL Sbjct: 202 KALRSRL 208>XP_006716817 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRSRLLC 9 LRS L+C Sbjct: 139 LRSNLIC 145>XP_005251496 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRSRLLC 9 LRS L+C Sbjct: 614 LRSNLIC 620>XP_006713721 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALRSRLLC 9 ALR ++LC Sbjct: 333 ALRIKILC 340Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.146 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 389,657 Number of extensions: 597 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |