Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_001129201 17 4312 NP_001129204 17 4312 NP_005479 17 4312 NP_001129202 17 4312 NP_057726 16 5631 XP_005254495 16 5631 NP_004371 16 7355 NP_001073315 16 7355 NP_982284 16 7355 NP_006083 16 7355 NP_443080 16 7355 XP_006726390 16 7355 XP_006726389 16 7355 XP_006726388 16 7355 XP_006726387 16 7355 XP_005259434 16 7355 XP_005255182 16 7355 XP_006720911 16 7355 XP_005255181 16 7355 XP_005249633 16 7355 XP_006715700 16 7355 XP_006715699 16 7355 XP_005249632 16 7355 XP_005249631 16 7355 XP_005249630 16 7355 XP_006715698 16 7355 XP_006715697 16 7355 XP_005249629 16 7355 XP_006715696 16 7355 XP_005249625 16 7355 XP_005245099 16 7355 XP_005245098 16 7355 XP_005245097 16 7355 XP_006711142 16 7355 XP_006711141 16 7355 XP_006711140 16 7355 XP_006710131 16 7355 XP_006710130 16 7355 XP_006710129 16 7355 XP_006710128 16 7355 NP_940820 15 9605 NP_001028776 15 9605 NP_001028777 15 9605 NP_055266 15 9605 NP_060915 15 9605 NP_982298 15 9605 NP_001275716 15 9605 NP_001275715 15 9605 NP_001275717 15 9605 NP_001275718 15 9605 NP_001076437 15 9605 NP_004775 15 9605 NP_001028723 15 9605 XP_005256523 15 9605 XP_005256520 15 9605 XP_005256519 15 9605 XP_006721515 15 9605 XP_005256518 15 9605 XP_005249758 15 9605 XP_006715751 15 9605 XP_005249757 15 9605 XP_006715750 15 9605 XP_006714479 15 9605 NP_071745 15 9605 NP_001123612 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3423 RALQQRMEM 3431>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3439 RALQQRMEM 3447>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQQRM M Sbjct: 3440 RALQQRMEM 3448>NP_001129201 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR+L Sbjct: 229 RAMQQRVL 236>NP_001129204 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR+L Sbjct: 262 RAMQQRVL 269>NP_005479 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR+L Sbjct: 262 RAMQQRVL 269>NP_001129202 Length = 447 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR+L Sbjct: 217 RAMQQRVL 224>NP_057726 Length = 3674 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 412 QALQQRLL 419>XP_005254495 Length = 3694 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 432 QALQQRLL 439>NP_004371 Length = 2442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 2289 QALQQRIL 2296>NP_001073315 Length = 2404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 2251 QALQQRIL 2258>NP_982284 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALQQRMLM 9 +LQQ MLM Sbjct: 902 SLQQEMLM 909>NP_006083 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>NP_443080 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 R LQQR+L Sbjct: 231 RELQQRLL 238>XP_006726390 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 648 QGLQQRML 655>XP_006726389 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 766 QGLQQRML 773>XP_006726388 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 784 QGLQQRML 791>XP_006726387 Length = 1497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 832 QGLQQRML 839>XP_005259434 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 R LQQR+L Sbjct: 166 RELQQRLL 173>XP_005255182 Length = 2303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 2150 QALQQRIL 2157>XP_006720911 Length = 2355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 2202 QALQQRIL 2209>XP_005255181 Length = 2427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 +ALQQR+L Sbjct: 2274 QALQQRIL 2281>XP_005249633 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 120 RALQDRLL 127>XP_006715700 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_006715699 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005249632 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005249631 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005249630 Length = 925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_006715698 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_006715697 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005249629 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_006715696 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005249625 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ R+L Sbjct: 368 RALQDRLL 375>XP_005245099 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALQQRMLM 9 +LQQ MLM Sbjct: 886 SLQQEMLM 893>XP_005245098 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALQQRMLM 9 +LQQ MLM Sbjct: 897 SLQQEMLM 904>XP_005245097 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALQQRMLM 9 +LQQ MLM Sbjct: 913 SLQQEMLM 920>XP_006711142 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 766 QGLQQRML 773>XP_006711141 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 784 QGLQQRML 791>XP_006711140 Length = 1497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 832 QGLQQRML 839>XP_006710131 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 648 QGLQQRML 655>XP_006710130 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 766 QGLQQRML 773>XP_006710129 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 784 QGLQQRML 791>XP_006710128 Length = 1497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 + LQQRML Sbjct: 832 QGLQQRML 839>NP_940820 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 674 RAIQRRLL 681>NP_001028776 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 639 RAIQRRLL 646>NP_001028777 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 669 RAIQRRLL 676>NP_055266 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 634 RAIQRRLL 641>NP_060915 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RAL+QR L Sbjct: 56 RALRQRQL 63>NP_982298 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RAL+QR L Sbjct: 56 RALRQRQL 63>NP_001275716 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 221 RAMQQRIV 228>NP_001275715 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 213 RAMQQRIV 220>NP_001275717 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 168 RAMQQRIV 175>NP_001275718 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 118 RAMQQRIV 125>NP_001076437 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 266 RAMQQRIV 273>NP_004775 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQ+R L+ Sbjct: 736 RALQKRCLV 744>NP_001028723 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 216 RAMQQRIV 223>XP_005256523 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 168 RAMQQRIV 175>XP_005256520 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 266 RAMQQRIV 273>XP_005256519 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 221 RAMQQRIV 228>XP_006721515 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 233 RAMQQRIV 240>XP_005256518 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+QQR++ Sbjct: 266 RAMQQRIV 273>XP_005249758 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 674 RAIQRRLL 681>XP_006715751 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 583 RAIQRRLL 590>XP_005249757 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 674 RAIQRRLL 681>XP_006715750 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RALQQRML 8 RA+Q+R+L Sbjct: 674 RAIQRRLL 681>XP_006714479 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RALQQRMLM 9 RALQ+R L+ Sbjct: 736 RALQKRCLV 744>NP_071745 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ+R L Sbjct: 578 RALQERYL 585>NP_001123612 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RALQQRML 8 RALQ+R L Sbjct: 578 RALQERYL 585Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.350 0.139 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,828 Number of extensions: 492 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |