Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 18 1935 NP_006026 17 2528 XP_005268287 17 2528 XP_005268286 17 2528 XP_005268285 17 2528 XP_005268284 17 2528 NP_067629 17 3301 NP_065761 17 3301 NP_569074 17 3301 NP_001003827 17 3301 NP_001003819 17 3301 NP_001157968 17 4312 XP_005247674 17 4312 XP_006713761 17 4312 XP_006713760 17 4312 XP_006713759 17 4312 NP_055855 16 5631 NP_001075019 16 5631 XP_006724836 16 5631 XP_005262507 16 5631 XP_006724835 16 5631 XP_006724834 16 5631 XP_006724833 16 5631 XP_006724832 16 5631 XP_006724831 16 5631 XP_006724830 16 5631 XP_005262504 16 5631 XP_006712426 16 5631 XP_006712425 16 5631 XP_006712424 16 5631 NP_071372 16 7355 NP_001135445 16 7355 NP_060555 16 7355 NP_588614 16 7355 NP_112593 16 7355 XP_005258418 16 7355 XP_006722617 16 7355 XP_005258415 16 7355 XP_005258414 16 7355 XP_005272299 16 7355 NP_060606 15 9605 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_149043 15 9605 NP_001139281 15 9605 NP_056053 15 9605 NP_056052 15 9605 NP_008949 15 9605 NP_006715 15 9605 NP_001070654 15 9605 NP_005913 15 9605 NP_079005 15 9605 NP_001155134 15 9605 NP_001155133 15 9605 XP_003960647 15 9605 XP_006723449 15 9605 XP_003403507 15 9605 XP_006717006 15 9605 XP_006717005 15 9605 XP_005251736 15 9605 XP_005267046 15 9605 XP_005267045 15 9605 XP_006714899 15 9605 XP_005265910 15 9605 XP_006714898 15 9605 XP_005265909 15 9605 XP_005265908 15 9605 XP_005265907 15 9605>NP_004295 Length = 1620 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 RAKQLV EL Sbjct: 137 RAKQLVLEL 145>NP_006026 Length = 1711 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268287 Length = 1490 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268286 Length = 1685 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268285 Length = 1702 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 RAKQLV+E Sbjct: 888 RAKQLVQE 895>XP_005268284 Length = 1728 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 RAKQLV+E Sbjct: 888 RAKQLVQE 895>NP_067629 Length = 488 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 KQLVREL Sbjct: 227 KQLVREL 233>NP_065761 Length = 583 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RAKQLVREL 9 +AK+LVR+L Sbjct: 408 KAKELVRQL 416>NP_569074 Length = 270 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 KQLVREL Sbjct: 227 KQLVREL 233>NP_001003827 Length = 488 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 KQLVREL Sbjct: 227 KQLVREL 233>NP_001003819 Length = 842 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 KQLVREL Sbjct: 581 KQLVREL 587>NP_001157968 Length = 1854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAKQLVRE 8 R KQL+RE Sbjct: 1676 RRKQLIRE 1683>XP_005247674 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAKQLVRE 8 R KQL+RE Sbjct: 911 RRKQLIRE 918>XP_006713761 Length = 1554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAKQLVRE 8 R KQL+RE Sbjct: 1376 RRKQLIRE 1383>XP_006713760 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAKQLVRE 8 R KQL+RE Sbjct: 1669 RRKQLIRE 1676>XP_006713759 Length = 1898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RAKQLVRE 8 R KQL+RE Sbjct: 1720 RRKQLIRE 1727>NP_055855 Length = 2098 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 R KQL+R+L Sbjct: 1102 RKKQLLRDL 1110>NP_001075019 Length = 1593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724836 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_005262507 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724835 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724834 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724833 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724832 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724831 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006724830 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_005262504 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKQLVREL 9 AKQ+VR+L Sbjct: 306 AKQIVRKL 313>XP_006712426 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 R KQL+R+L Sbjct: 408 RKKQLLRDL 416>XP_006712425 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 R KQL+R+L Sbjct: 408 RKKQLLRDL 416>XP_006712424 Length = 1376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 R KQL+R+L Sbjct: 408 RKKQLLRDL 416>NP_071372 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL REL Sbjct: 1158 RFKQLEREL 1166>NP_001135445 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL REL Sbjct: 1153 RFKQLEREL 1161>NP_060555 Length = 1041 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 RAK ++REL Sbjct: 104 RAKIVIREL 112>NP_588614 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 +AK+L+RE Sbjct: 562 KAKKLIRE 569>NP_112593 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKQLVRE 8 AKQLV+E Sbjct: 190 AKQLVKE 196>XP_005258418 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKQLVRE 8 AKQLV+E Sbjct: 151 AKQLVKE 157>XP_006722617 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKQLVRE 8 AKQLV+E Sbjct: 262 AKQLVKE 268>XP_005258415 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKQLVRE 8 AKQLV+E Sbjct: 287 AKQLVKE 293>XP_005258414 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AKQLVRE 8 AKQLV+E Sbjct: 288 AKQLVKE 294>XP_005272299 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AKQLVREL 9 A QLVREL Sbjct: 71 ALQLVREL 78>NP_060606 Length = 3477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 +A+QL+RE Sbjct: 2545 KARQLLRE 2552>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1885 RVKQLKRQL 1893>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1878 RVKQLKRQL 1886>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1885 RVKQLKRQL 1893>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1878 RVKQLKRQL 1886>NP_149043 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAKQLVREL 9 RA+QLV+ + Sbjct: 796 RARQLVKNI 804>NP_001139281 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1936 RVKQLKRQL 1944>NP_056053 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RAKQLVRE 8 R++QL+RE Sbjct: 1107 RSRQLLRE 1114>NP_008949 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RAKQLVREL 9 RA++L++EL Sbjct: 2118 RARRLMKEL 2126>NP_006715 Length = 1558 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KQLVRE 8 KQLVRE Sbjct: 649 KQLVRE 654>NP_001070654 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1903 RVKQLKRQL 1911>NP_005913 Length = 1608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KQLVRE 8 KQLVRE Sbjct: 649 KQLVRE 654>NP_079005 Length = 1995 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1895 RVKQLKRQL 1903>NP_001155134 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>NP_001155133 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>XP_003960647 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 +QLVREL Sbjct: 72 QQLVREL 78>XP_006723449 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 R KQL R+L Sbjct: 1903 RVKQLKRQL 1911>XP_003403507 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KQLVREL 9 +QLVREL Sbjct: 72 QQLVREL 78>XP_006717006 Length = 1760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RAKQLVREL 9 RA++L++EL Sbjct: 1553 RARRLMKEL 1561>XP_006717005 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RAKQLVREL 9 RA++L++EL Sbjct: 1581 RARRLMKEL 1589>XP_005251736 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RAKQLVREL 9 RA++L++EL Sbjct: 2118 RARRLMKEL 2126>XP_005267046 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KQLVRE 8 KQLVRE Sbjct: 649 KQLVRE 654>XP_005267045 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KQLVRE 8 KQLVRE Sbjct: 649 KQLVRE 654>XP_006714899 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 158 KRNQLVREL 166>XP_005265910 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>XP_006714898 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>XP_005265909 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>XP_005265908 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409>XP_005265907 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAKQLVREL 9 + QLVREL Sbjct: 401 KRNQLVREL 409Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.137 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,592 Number of extensions: 1050 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |