Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 XP_005255358 18 1482 XP_005255356 18 1482 XP_005255355 18 1482 NP_001138483 18 1482 XP_005275744 17 2528 NP_689824 17 4312 XP_005257359 17 4312 NP_005524 17 4312 NP_009049 16 5631 NP_001128653 16 5631 NP_001011547 16 5631 XP_006714558 16 5631 NP_055833 15 9605 NP_001186871 15 9605 NP_055843 15 9605 NP_001155038 15 9605 NP_001155037 15 9605 NP_001155036 15 9605 NP_001155035 15 9605 NP_001155034 15 9605 NP_001155033 15 9605 NP_001155032 15 9605 XP_006715462 15 9605 XP_006715461 15 9605 XP_006715460 15 9605 XP_006715459 15 9605 XP_006715458 15 9605 XP_006715457 15 9605 XP_006715456 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAIFTSEIG 9 R IFTSEIG Sbjct: 2940 RGIFTSEIG 2948>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RAIFTSEIG 9 R IFTSEIG Sbjct: 2940 RGIFTSEIG 2948>XP_005255358 Length = 1086 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIFTSEIG 9 A+FTSEIG Sbjct: 227 AMFTSEIG 234>XP_005255356 Length = 1114 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIFTSEIG 9 A+FTSEIG Sbjct: 200 AMFTSEIG 207>XP_005255355 Length = 1121 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIFTSEIG 9 A+FTSEIG Sbjct: 227 AMFTSEIG 234>NP_001138483 Length = 1141 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIFTSEIG 9 A+FTSEIG Sbjct: 227 AMFTSEIG 234>XP_005275744 Length = 231 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AIFTSEIG 9 A+FTS+IG Sbjct: 191 ALFTSQIG 198>NP_689824 Length = 740 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RAIFTSEIG 9 RA+ TSE+G Sbjct: 88 RALSTSELG 96>XP_005257359 Length = 286 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AIFTSEIG 9 A+FTSE G Sbjct: 279 AVFTSESG 286>NP_005524 Length = 288 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AIFTSEIG 9 A+FTSE G Sbjct: 281 AVFTSESG 288>NP_009049 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFTSEIG 9 +FTSE+G Sbjct: 1537 LFTSELG 1543>NP_001128653 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAIFTSEIG 9 RA+F E+G Sbjct: 365 RALFPDEVG 373>NP_001011547 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAIFTSEIG 9 RA+F E+G Sbjct: 340 RALFPDEVG 348>XP_006714558 Length = 2612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFTSEIG 9 +FTSE+G Sbjct: 1052 LFTSELG 1058>NP_055833 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2184 AIFSSEI 2190>NP_001186871 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2175 AIFSSEI 2181>NP_055843 Length = 1360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 1000 ALFTSEL 1006>NP_001155038 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 908 ALFTSEL 914>NP_001155037 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 916 ALFTSEL 922>NP_001155036 Length = 1297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 937 ALFTSEL 943>NP_001155035 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 945 ALFTSEL 951>NP_001155034 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 963 ALFTSEL 969>NP_001155033 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 971 ALFTSEL 977>NP_001155032 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 A+FTSE+ Sbjct: 992 ALFTSEL 998>XP_006715462 Length = 2452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2151 AIFSSEI 2157>XP_006715461 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2175 AIFSSEI 2181>XP_006715460 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2184 AIFSSEI 2190>XP_006715459 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2174 AIFSSEI 2180>XP_006715458 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2175 AIFSSEI 2181>XP_006715457 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2184 AIFSSEI 2190>XP_006715456 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIFTSEI 8 AIF+SEI Sbjct: 2184 AIFSSEI 2190Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.141 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 345,943 Number of extensions: 481 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |