Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001074011 17 4312 NP_001257449 16 5631 NP_055807 16 5631 NP_001120936 16 5631 NP_054722 16 5631 XP_005256326 16 5631 XP_005267488 16 5631 XP_005267487 16 5631 NP_001137300 16 7355 NP_002325 16 7355 NP_067637 16 7355 NP_036533 16 7355 XP_005261968 16 7355 XP_005261966 16 7355 XP_005261967 16 7355 XP_006724476 16 7355 XP_005261965 16 7355 XP_006718294 16 7355 XP_005252980 16 7355 NP_006444 16 7355 NP_005912 15 9605 NP_001159417 15 9605 NP_060501 15 9605 NP_057740 15 9605 NP_065073 15 9605 XP_005262032 15 9605 XP_005262031 15 9605 XP_005262030 15 9605 XP_006715582 15 9605 XP_005248577 15 9605 XP_005248576 15 9605 XP_005264894 15 9605 XP_006710132 15 9605>NP_001074011 Length = 1133 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AHSRSINS 9 +H+RS+NS Sbjct: 731 SHTRSLNS 738>NP_001257449 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AHSRSIN 8 AHS SIN Sbjct: 200 AHSESIN 206>NP_055807 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AHSRSIN 8 AHS SIN Sbjct: 200 AHSESIN 206>NP_001120936 Length = 3925 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RAHSRS 6 RAHSRS Sbjct: 2752 RAHSRS 2757>NP_054722 Length = 1227 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSRSINS 9 AH RS+N+ Sbjct: 654 AHERSLNT 661>XP_005256326 Length = 1192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AHSRSINS 9 AH RS+N+ Sbjct: 619 AHERSLNT 626>XP_005267488 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AHSRSIN 8 AHS SIN Sbjct: 200 AHSESIN 206>XP_005267487 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AHSRSIN 8 AHS SIN Sbjct: 200 AHSESIN 206>NP_001137300 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSRSINS 9 HSRS++S Sbjct: 296 HSRSVSS 302>NP_002325 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSRSINS 9 H++SINS Sbjct: 659 HTKSINS 665>NP_067637 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSRSINS 9 HSRS++S Sbjct: 384 HSRSVSS 390>NP_036533 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1779 RAHTDSLNT 1787>XP_005261968 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1779 RAHTDSLNT 1787>XP_005261966 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1779 RAHTDSLNT 1787>XP_005261967 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1779 RAHTDSLNT 1787>XP_006724476 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1779 RAHTDSLNT 1787>XP_005261965 Length = 1920 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RAHSRSINS 9 RAH+ S+N+ Sbjct: 1861 RAHTDSLNT 1869>XP_006718294 Length = 1808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSRSINS 9 H++SINS Sbjct: 659 HTKSINS 665>XP_005252980 Length = 1809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HSRSINS 9 H++SINS Sbjct: 659 HTKSINS 665>NP_006444 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RAHSRSINS 9 R H + INS Sbjct: 476 RCHDKDINS 484>NP_005912 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAHSRSINS 9 R HS+ +NS Sbjct: 961 RPHSQCLNS 969>NP_001159417 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAHSRSIN 8 RAH RS++ Sbjct: 40 RAHLRSVS 47>NP_060501 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAHSRSINS 9 +AHS INS Sbjct: 1007 QAHSCGINS 1015>NP_057740 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAHSRSINS 9 R HS INS Sbjct: 79 RIHSLQINS 87>NP_065073 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HSRSINS 9 H RSIN+ Sbjct: 151 HQRSINT 157>XP_005262032 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAHSRSINS 9 R HS INS Sbjct: 79 RIHSLQINS 87>XP_005262031 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAHSRSINS 9 R HS INS Sbjct: 79 RIHSLQINS 87>XP_005262030 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RAHSRSINS 9 R HS INS Sbjct: 41 RIHSLQINS 49>XP_006715582 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 HSRSINS 9 H RSIN+ Sbjct: 80 HQRSINT 86>XP_005248577 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAHSRSINS 9 R HS+ +NS Sbjct: 798 RPHSQCLNS 806>XP_005248576 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RAHSRSINS 9 R HS+ +NS Sbjct: 824 RPHSQCLNS 832>XP_005264894 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RAHSRSINS 9 +AHS INS Sbjct: 926 QAHSCGINS 934>XP_006710132 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RAHSRSIN 8 RAH RS++ Sbjct: 40 RAHLRSVS 47Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.111 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 562,119 Number of extensions: 797 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |