Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000305                                                              20     299
XP_006717989                                                           20     299
XP_006722014                                                           18    1482
NP_000515                                                              17    2528
NP_003277                                                              17    2528
NP_443195                                                              17    2528
NP_001245375                                                           17    2528
NP_001245376                                                           17    2528
XP_005250839                                                           17    2528
XP_005250838                                                           17    2528
XP_005250837                                                           17    2528
NP_443173                                                              17    3301
NP_005094                                                              17    4312
XP_005271792                                                           17    4312
XP_005271791                                                           17    4312
NP_061979                                                              16    5631
NP_663786                                                              16    5631
NP_001091742                                                           16    7355
NP_001243888                                                           16    7355
NP_001277                                                              16    7355
NP_998823                                                              16    7355
NP_998822                                                              16    7355
NP_038459                                                              16    7355
NP_660293                                                              16    7355
NP_002121                                                              16    7355
NP_015567                                                              16    7355
XP_005253417                                                           16    7355
XP_005251553                                                           16    7355
XP_005248352                                                           16    7355
NP_002250                                                              16    7355
NP_060281                                                              16    7355
NP_071331                                                              15    9605
NP_073624                                                              15    9605
NP_003625                                                              15    9605
NP_001189431                                                           15    9605
NP_852664                                                              15    9605
NP_852556                                                              15    9605
NP_005171                                                              15    9605
NP_001156769                                                           15    9605
NP_001156768                                                           15    9605
NP_004945                                                              15    9605
NP_059672                                                              15    9605
NP_689819                                                              15    9605
NP_852665                                                              15    9605
NP_001229395                                                           15    9605
NP_001034558                                                           15    9605
NP_001106995                                                           15    9605
NP_813977                                                              15    9605
NP_003311                                                              15    9605
NP_001107644                                                           15    9605
NP_006697                                                              15    9605
NP_001035095                                                           15    9605
NP_005018                                                              15    9605
NP_004757                                                              15    9605
NP_001165697                                                           15    9605
NP_003620                                                              15    9605
NP_001243549                                                           15    9605
NP_114141                                                              15    9605
NP_001190991                                                           15    9605
NP_001165696                                                           15    9605
NP_004434                                                              15    9605
XP_005261846                                                           15    9605
XP_006718995                                                           15    9605
XP_005274425                                                           15    9605
XP_006718994                                                           15    9605
XP_006718993                                                           15    9605
XP_005274424                                                           15    9605
XP_005274423                                                           15    9605
XP_006718509                                                           15    9605
XP_006718508                                                           15    9605
XP_006718507                                                           15    9605
XP_006718506                                                           15    9605
XP_006718505                                                           15    9605
XP_006718504                                                           15    9605
XP_005253166                                                           15    9605
XP_006717832                                                           15    9605
XP_006717831                                                           15    9605
XP_005268424                                                           15    9605
XP_005268423                                                           15    9605
XP_005268422                                                           15    9605
XP_005248599                                                           15    9605
XP_005247218                                                           15    9605
XP_005247217                                                           15    9605
XP_005247216                                                           15    9605
XP_005271347                                                           15    9605
XP_006710887                                                           15    9605
NP_612478                                                              15    9605
NP_055287                                                              15    9605
NP_001243548                                                           15    9605
NP_203753                                                              15    9605
NP_078850                                                              15    9605
>NP_000305
          Length = 403

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RAGNDKEYL 9
           RA NDKEYL
Sbjct: 308 RADNDKEYL 316
>XP_006717989
          Length = 388

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RAGNDKEYL 9
           RA NDKEYL
Sbjct: 293 RADNDKEYL 301
>XP_006722014
          Length = 379

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2  AGNDKEYL 9
          AG+DKEY+
Sbjct: 19 AGDDKEYV 26
>NP_000515
          Length = 422

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R GN KE+L
Sbjct: 297 RVGNSKEHL 305
>NP_003277
          Length = 765

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 488 RAGNEKE 494
>NP_443195
          Length = 601

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 324 RAGNEKE 330
>NP_001245375
          Length = 503

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 226 RAGNEKE 232
>NP_001245376
          Length = 503

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 226 RAGNEKE 232
>XP_005250839
          Length = 641

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 364 RAGNEKE 370
>XP_005250838
          Length = 682

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 324 RAGNEKE 330
>XP_005250837
          Length = 722

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RAGNDKE 7
           RAGN+KE
Sbjct: 364 RAGNEKE 370
>NP_443173
          Length = 640

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R  NDK+YL
Sbjct: 253 RPTNDKQYL 261
>NP_005094
          Length = 392

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   AGNDKEYL 9
           +G DK+YL
Sbjct: 335 SGTDKQYL 342
>XP_005271792
          Length = 392

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   AGNDKEYL 9
           +G DK+YL
Sbjct: 335 SGTDKQYL 342
>XP_005271791
          Length = 392

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   AGNDKEYL 9
           +G DK+YL
Sbjct: 335 SGTDKQYL 342
>NP_061979
          Length = 350

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   GNDKEY 8
           G+DKEY
Sbjct: 265 GSDKEY 270
>NP_663786
          Length = 358

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   GNDKEY 8
           G+DKEY
Sbjct: 265 GSDKEY 270
>NP_001091742
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   RAGNDKEY 8
           + GNDK++
Sbjct: 246 KEGNDKDF 253
>NP_001243888
          Length = 847

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   GNDKEYL 9
           GN+KE++
Sbjct: 619 GNEKEFM 625
>NP_001277
          Length = 869

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   GNDKEYL 9
           GN+KE++
Sbjct: 641 GNEKEFM 647
>NP_998823
          Length = 233

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>NP_998822
          Length = 215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>NP_038459
          Length = 158

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>NP_660293
          Length = 199

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  AGNDKE 7
          +GNDKE
Sbjct: 91 SGNDKE 96
>NP_002121
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   RAGNDKEY 8
           + GNDK++
Sbjct: 246 KEGNDKDF 253
>NP_015567
          Length = 215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>XP_005253417
          Length = 228

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>XP_005251553
          Length = 209

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   GNDKEY 8
           G DKEY
Sbjct: 127 GKDKEY 132
>XP_005248352
          Length = 478

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   RAGNDKEY 8
           + GNDK++
Sbjct: 204 KEGNDKDF 211
>NP_002250
          Length = 233

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3  GNDKEY 8
          GNDK Y
Sbjct: 54 GNDKTY 59
>NP_060281
          Length = 238

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   GNDKEY 8
           G DKEY
Sbjct: 156 GKDKEY 161
>NP_071331
          Length = 422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R GN KE++
Sbjct: 174 RQGNKKEHV 182
>NP_073624
          Length = 279

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           RAGND +
Sbjct: 188 RAGNDAQ 194
>NP_003625
          Length = 284

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NDKEYL 9
           N+KEYL
Sbjct: 144 NNKEYL 149
>NP_001189431
          Length = 264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NDKEYL 9
           N+KEYL
Sbjct: 124 NNKEYL 129
>NP_852664
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 514 REGNEKE 520
>NP_852556
          Length = 454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 244 REGNEKE 250
>NP_005171
          Length = 326

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   NDKEYL 9
           NDK YL
Sbjct: 159 NDKRYL 164
>NP_001156769
          Length = 709

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 598 GNDKE 602
>NP_001156768
          Length = 719

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 608 GNDKE 612
>NP_004945
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 613 GNDKE 617
>NP_059672
          Length = 745

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 634 GNDKE 638
>NP_689819
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R GN KE+L
Sbjct: 534 RRGNLKEHL 542
>NP_852665
          Length = 424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 214 REGNEKE 220
>NP_001229395
          Length = 361

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 151 REGNEKE 157
>NP_001034558
          Length = 788

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 677 GNDKE 681
>NP_001106995
          Length = 678

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RAGNDKE 7
          RAG D+E
Sbjct: 32 RAGRDRE 38
>NP_813977
          Length = 506

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   GNDKEYL 9
           GND +Y+
Sbjct: 460 GNDPDYI 466
>NP_003311
          Length = 561

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   GNDKEYL 9
           GND +Y+
Sbjct: 515 GNDPDYI 521
>NP_001107644
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 246 REGNEKE 252
>NP_006697
          Length = 1098

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    NDKEYL 9
            NDK YL
Sbjct: 1053 NDKRYL 1058
>NP_001035095
          Length = 1077

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    NDKEYL 9
            NDK YL
Sbjct: 1032 NDKRYL 1037
>NP_005018
          Length = 728

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 511 REGNEKE 517
>NP_004757
          Length = 906

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   AGNDKEYL 9
           +G DK YL
Sbjct: 195 SGGDKPYL 202
>NP_001165697
          Length = 628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R GN KE+L
Sbjct: 502 RRGNLKEHL 510
>NP_003620
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 246 REGNEKE 252
>NP_001243549
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>NP_114141
          Length = 5635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    NDKEYL 9
            +DKEYL
Sbjct: 3608 DDKEYL 3613
>NP_001190991
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   NDKEYL 9
           NDK YL
Sbjct: 302 NDKRYL 307
>NP_001165696
          Length = 660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RAGNDKEYL 9
           R GN KE+L
Sbjct: 534 RRGNLKEHL 542
>NP_004434
          Length = 998

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RAGNDKEY 8
           R G+D EY
Sbjct: 586 RHGSDSEY 593
>XP_005261846
          Length = 260

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NDKEYL 9
           N+KEYL
Sbjct: 120 NNKEYL 125
>XP_006718995
          Length = 2382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1567 AGNDQE 1572
>XP_005274425
          Length = 2566

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1800 AGNDQE 1805
>XP_006718994
          Length = 2567

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1800 AGNDQE 1805
>XP_006718993
          Length = 2602

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1787 AGNDQE 1792
>XP_005274424
          Length = 2614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1800 AGNDQE 1805
>XP_005274423
          Length = 2615

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1800 AGNDQE 1805
>XP_006718509
          Length = 725

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 614 GNDKE 618
>XP_006718508
          Length = 733

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 622 GNDKE 626
>XP_006718507
          Length = 764

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 653 GNDKE 657
>XP_006718506
          Length = 773

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 662 GNDKE 666
>XP_006718505
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 667 GNDKE 671
>XP_006718504
          Length = 779

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 3   GNDKE 7
           GNDKE
Sbjct: 668 GNDKE 672
>XP_005253166
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   GNDKEYL 9
           GND +Y+
Sbjct: 502 GNDPDYI 508
>XP_006717832
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>XP_006717831
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>XP_005268424
          Length = 1054

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    NDKEYL 9
            NDK YL
Sbjct: 1009 NDKRYL 1014
>XP_005268423
          Length = 1094

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    NDKEYL 9
            NDK YL
Sbjct: 1049 NDKRYL 1054
>XP_005268422
          Length = 1115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4    NDKEYL 9
            NDK YL
Sbjct: 1070 NDKRYL 1075
>XP_005248599
          Length = 724

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 514 REGNEKE 520
>XP_005247218
          Length = 483

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RAGNDKE 7
          RAG D+E
Sbjct: 32 RAGRDRE 38
>XP_005247217
          Length = 602

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RAGNDKE 7
          RAG D+E
Sbjct: 32 RAGRDRE 38
>XP_005247216
          Length = 609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RAGNDKE 7
          RAG D+E
Sbjct: 32 RAGRDRE 38
>XP_005271347
          Length = 478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R GN+KE
Sbjct: 263 REGNEKE 269
>XP_006710887
          Length = 279

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           RAGND +
Sbjct: 188 RAGNDAQ 194
>NP_612478
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>NP_055287
          Length = 778

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>NP_001243548
          Length = 792

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RAGNDKE 7
           R+GND E
Sbjct: 429 RSGNDTE 435
>NP_203753
          Length = 2601

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2    AGNDKE 7
            AGND+E
Sbjct: 1787 AGNDQE 1792
>NP_078850
          Length = 568

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   GNDKEY 8
           GND EY
Sbjct: 130 GNDVEY 135
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.309    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 847,404
Number of extensions: 1665
Number of successful extensions: 91
Number of sequences better than 10000.0: 91
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 91
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

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