Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 869 NP_444254 19 869 NP_444253 19 869 NP_444255 19 869 XP_005247551 19 869 XP_005247550 19 869 XP_006713712 19 869 XP_005247549 19 869 NP_689585 17 2528 NP_064546 16 5631 NP_001155955 16 5631 NP_036243 16 5631 NP_001165405 16 7355 NP_001165404 16 7355 NP_071407 16 7355 NP_543016 16 7355 NP_114088 16 7355 NP_001171313 16 7355 NP_003130 16 7355 NP_061721 16 7355 NP_689854 16 7355 XP_006719336 16 7355 XP_006719335 16 7355 XP_006718005 16 7355 XP_006718004 16 7355 XP_006718003 16 7355 XP_005275746 16 7355 XP_003403671 16 7355 XP_006710003 16 7355 NP_073754 16 7355 NP_473446 15 9605 NP_006819 15 9605 NP_001399 15 9605 XP_006715385 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 NP_061741 15 9605 NP_114443 15 9605>NP_444256 Length = 1794 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1253 QVNLTVVDK 1261>NP_444254 Length = 1845 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1253 QVNLTVVDK 1261>NP_444253 Length = 1914 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1322 QVNLTVVDK 1330>NP_444255 Length = 1863 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1322 QVNLTVVDK 1330>XP_005247551 Length = 1855 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1263 QVNLTVVDK 1271>XP_005247550 Length = 1856 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1332 QVNLTVVDK 1340>XP_006713712 Length = 1923 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1332 QVNLTVVDK 1340>XP_005247549 Length = 1924 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QV LTVVDK Sbjct: 1332 QVNLTVVDK 1340>NP_689585 Length = 1437 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 Q+TLT+VD Sbjct: 1090 QITLTLVD 1097>NP_064546 Length = 150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VTLTVVD 8 VT+TVVD Sbjct: 22 VTMTVVD 28>NP_001155955 Length = 96 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VTLTVVD 8 VT+TVVD Sbjct: 22 VTMTVVD 28>NP_036243 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTLTVVDK 9 +TLT +DK Sbjct: 287 ITLTFIDK 294>NP_001165405 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 15 EVTLSVID 22>NP_001165404 Length = 1114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 15 EVTLSVID 22>NP_071407 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2255 EVTLSVID 2262>NP_543016 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVTLTVVD 8 QVT+ VVD Sbjct: 126 QVTIEVVD 133>NP_114088 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVTLTVVD 8 QVT+ VVD Sbjct: 218 QVTIIVVD 225>NP_001171313 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLTVVDK 9 +TLT VDK Sbjct: 46 LTLTYVDK 53>NP_003130 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLTVVDK 9 +TLT VDK Sbjct: 74 LTLTYVDK 81>NP_061721 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVTLTVVD 8 QVT+ VVD Sbjct: 218 QVTIIVVD 225>NP_689854 Length = 1835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVTLTVV 7 QVT+TVV Sbjct: 1171 QVTITVV 1177>XP_006719336 Length = 1779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVTLTVV 7 QVT+TVV Sbjct: 1115 QVTITVV 1121>XP_006719335 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVTLTVV 7 QVT+TVV Sbjct: 1171 QVTITVV 1177>XP_006718005 Length = 3397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2298 EVTLSVID 2305>XP_006718004 Length = 3399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2300 EVTLSVID 2307>XP_006718003 Length = 3419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2320 EVTLSVID 2327>XP_005275746 Length = 3352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2253 EVTLSVID 2260>XP_003403671 Length = 3354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2255 EVTLSVID 2262>XP_006710003 Length = 3374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VTL+V+D Sbjct: 2275 EVTLSVID 2282>NP_073754 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLTVVDK 9 V LTV+DK Sbjct: 625 VALTVLDK 632>NP_473446 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLTVVD 8 +TLT+VD Sbjct: 44 ITLTLVD 50>NP_006819 Length = 2202 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QVT+ ++D+ Sbjct: 1446 QVTILIIDE 1454>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VT+TV+D Sbjct: 906 EVTVTVLD 913>XP_006715385 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QVTLTVVDK 9 QVT+ ++D+ Sbjct: 1110 QVTILIIDE 1118>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VT+TV+D Sbjct: 906 EVTVTVLD 913>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVTLTVVD 8 +VT+TV+D Sbjct: 906 EVTVTVLD 913>NP_061741 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLTVVD 8 +TLTV+D Sbjct: 420 ITLTVMD 426>NP_114443 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLTVVD 8 +TLTV+D Sbjct: 420 ITLTVMD 426Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.128 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 324,806 Number of extensions: 519 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |