Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 665 NP_004561 19 665 XP_005253450 19 665 XP_006719151 19 665 XP_006722357 18 1935 NP_003408 16 5631 NP_001018857 16 5631 XP_005259487 16 5631 XP_006723570 16 5631 NP_597703 16 7355 NP_001263272 16 7355 NP_001138811 16 7355 NP_002383 16 7355 NP_001137472 16 7355 NP_478137 16 7355 NP_005640 16 7355 NP_001177739 16 7355 NP_001071153 16 7355 NP_001138809 16 7355 XP_005276439 16 7355 XP_005276438 16 7355 XP_006719463 16 7355 XP_006719462 16 7355 XP_005268929 16 7355 XP_006717918 16 7355 XP_006717917 16 7355 XP_006717916 16 7355 XP_005269893 16 7355 XP_005271857 16 7355 XP_006717684 16 7355 XP_006717682 16 7355 XP_005271854 16 7355 XP_006716433 16 7355 XP_005273633 16 7355 XP_006716432 16 7355 XP_005273632 16 7355 XP_006710000 16 7355 NP_001071133 16 7355 NP_112561 16 7355 NP_899231 15 9605>NP_001275701 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL FDQI Sbjct: 35 QVSLGFDQI 43>NP_004561 Length = 1445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL FDQI Sbjct: 35 QVSLGFDQI 43>XP_005253450 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL FDQI Sbjct: 35 QVSLGFDQI 43>XP_006719151 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL FDQI Sbjct: 35 QVSLGFDQI 43>XP_006722357 Length = 347 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSLSF Q+ Sbjct: 55 QVSLSFPQV 63Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 Q+SLSF Q+ Sbjct: 130 QISLSFPQV 138>NP_003408 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVS++FD + Sbjct: 11 QVSVTFDDV 19>NP_001018857 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVS++FD + Sbjct: 10 QVSVTFDDV 18>XP_005259487 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVS++FD + Sbjct: 12 QVSVTFDDV 20>XP_006723570 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVS++FD + Sbjct: 11 QVSVTFDDV 19>NP_597703 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_001263272 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_001138811 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 140 ISLSFDE 146>NP_002383 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 195 ISLSFDE 201>NP_001137472 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_478137 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL+F+ + Sbjct: 11 QVSLTFEDV 19>NP_005640 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVSLSFDQI 9 QVSL+F+ + Sbjct: 11 QVSLTFEDV 19>NP_001177739 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_001071153 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_001138809 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 189 ISLSFDE 195>XP_005276439 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_005276438 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_006719463 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 88 ISLSFDE 94>XP_006719462 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 128 ISLSFDE 134>XP_005268929 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSLSFDQ 8 +SLSFD+ Sbjct: 189 ISLSFDE 195>XP_006717918 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_006717917 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_006717916 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 66 VSLEFDQ 72>XP_005269893 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 66 VSLEFDQ 72>XP_005271857 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_006717684 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>XP_006717682 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 66 VSLEFDQ 72>XP_005271854 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 66 VSLEFDQ 72>XP_006716433 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVSLSFD 7 ++SLSFD Sbjct: 1133 EISLSFD 1139>XP_005273633 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVSLSFD 7 ++SLSFD Sbjct: 1133 EISLSFD 1139>XP_006716432 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVSLSFD 7 ++SLSFD Sbjct: 1236 EISLSFD 1242>XP_005273632 Length = 3172 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVSLSFD 7 ++SLSFD Sbjct: 1236 EISLSFD 1242>XP_006710000 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_001071133 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSLSFDQ 8 VSL FDQ Sbjct: 13 VSLEFDQ 19>NP_112561 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QVSLSFD 7 ++SLSFD Sbjct: 853 EISLSFD 859>NP_899231 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QVSLSFD 7 QVSL FD Sbjct: 42 QVSLHFD 48Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.134 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,356 Number of extensions: 432 Number of successful extensions: 41 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |