Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 509 NP_004561 20 509 XP_005253450 20 509 XP_006719151 20 509 NP_689824 17 2528 NP_001230085 17 4312 NP_005670 17 4312 NP_647610 17 4312 NP_001230089 17 4312 NP_001230088 17 4312 NP_001230087 17 4312 NP_001230086 17 4312 NP_060862 17 4312 XP_006721392 17 4312 XP_006721391 17 4312 XP_005256284 17 4312 XP_006721389 17 4312 XP_005256283 17 4312 XP_006721388 17 4312 XP_005263172 17 4312 XP_006725527 16 5631 XP_006726289 16 5631 XP_006726288 16 5631 XP_006714809 16 5631 XP_006710031 16 5631 NP_778205 16 7355 NP_778204 16 7355 NP_008858 16 7355 NP_477515 16 7355 NP_077274 16 7355 NP_001139555 16 7355 NP_001139554 16 7355 NP_001139528 16 7355 NP_919440 16 7355 NP_919439 16 7355 XP_005251979 16 7355 XP_006710397 16 7355 XP_005244776 16 7355 XP_006710396 16 7355 XP_005244775 16 7355 NP_849150 16 7355 NP_919296 16 7355 NP_001181915 15 9605 XP_006718995 15 9605 XP_005274425 15 9605 XP_006718994 15 9605 XP_006718993 15 9605 XP_005274424 15 9605 XP_005274423 15 9605 XP_006710703 15 9605 NP_203753 15 9605>NP_001275701 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSKAPTIG 9 QVSKAP IG Sbjct: 100 QVSKAPAIG 108>NP_004561 Length = 1445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSKAPTIG 9 QVSKAP IG Sbjct: 100 QVSKAPAIG 108>XP_005253450 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSKAPTIG 9 QVSKAP IG Sbjct: 100 QVSKAPAIG 108>XP_006719151 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVSKAPTIG 9 QVSKAP IG Sbjct: 100 QVSKAPAIG 108>NP_689824 Length = 740 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSKAPTIG 9 VSKAP +G Sbjct: 406 VSKAPNVG 413>NP_001230085 Length = 843 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 536 KAPTIG 541>NP_005670 Length = 869 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 562 KAPTIG 567>NP_647610 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 468 KAPTIG 473>NP_001230089 Length = 392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 85 KAPTIG 90>NP_001230088 Length = 460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 153 KAPTIG 158>NP_001230087 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 230 KAPTIG 235>NP_001230086 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 230 KAPTIG 235>NP_060862 Length = 2104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKAPTIG 9 S+APTIG Sbjct: 1678 SEAPTIG 1684>XP_006721392 Length = 744 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 437 KAPTIG 442>XP_006721391 Length = 744 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 437 KAPTIG 442>XP_005256284 Length = 802 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 495 KAPTIG 500>XP_006721389 Length = 844 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 537 KAPTIG 542>XP_005256283 Length = 869 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 562 KAPTIG 567>XP_006721388 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KAPTIG 9 KAPTIG Sbjct: 563 KAPTIG 568>XP_005263172 Length = 2104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SKAPTIG 9 S+APTIG Sbjct: 1678 SEAPTIG 1684>XP_006725527 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 394 VSKAPTM 400Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 662 VSKAPTM 668Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 933 VSKAPTM 939Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 1204 VSKAPTM 1210>XP_006726289 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 236 VSKAPTM 242Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 507 VSKAPTM 513Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 779 VSKAPTM 785>XP_006726288 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 266 VSKAPTM 272Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 538 VSKAPTM 544>XP_006714809 Length = 1574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 394 VSKAPTM 400Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 662 VSKAPTM 668Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 933 VSKAPTM 939Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 1205 VSKAPTM 1211Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSKAPTI 8 VSKAPT+ Sbjct: 1476 VSKAPTM 1482>XP_006710031 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SKAPTIG 9 S+APT+G Sbjct: 64 SRAPTLG 70>NP_778205 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QVSKAPTIG 9 ++++APT+G Sbjct: 18 RMNQAPTVG 26>NP_778204 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QVSKAPTIG 9 ++++APT+G Sbjct: 102 RMNQAPTVG 110>NP_008858 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QVSKAPTIG 9 ++++APT+G Sbjct: 178 RMNQAPTVG 186>NP_477515 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 123 VEKGPTLG 130>NP_077274 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 SK PT+G Sbjct: 135 SKGPTLG 141>NP_001139555 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 SK PT+G Sbjct: 62 SKGPTLG 68>NP_001139554 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 SK PT+G Sbjct: 135 SKGPTLG 141>NP_001139528 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 SK PT+G Sbjct: 62 SKGPTLG 68>NP_919440 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 71 VEKGPTLG 78>NP_919439 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 71 VEKGPTLG 78>XP_005251979 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QVSKAPTIG 9 ++++APT+G Sbjct: 102 RMNQAPTVG 110>XP_006710397 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 44 VEKGPTLG 51>XP_005244776 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 123 VEKGPTLG 130>XP_006710396 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 123 VEKGPTLG 130>XP_005244775 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 123 VEKGPTLG 130>NP_849150 Length = 1445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVSKAPTIG 9 QVS A T+G Sbjct: 421 QVSDATTVG 429>NP_919296 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VSKAPTIG 9 V K PT+G Sbjct: 139 VEKGPTLG 146>NP_001181915 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 S APT+G Sbjct: 490 SSAPTLG 496>XP_006718995 Length = 2382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 189 SKAPTV 194>XP_005274425 Length = 2566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427>XP_006718994 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427>XP_006718993 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427>XP_005274424 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427>XP_005274423 Length = 2615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427>XP_006710703 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SKAPTIG 9 S APT+G Sbjct: 525 SSAPTLG 531>NP_203753 Length = 2601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SKAPTI 8 SKAPT+ Sbjct: 422 SKAPTV 427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.122 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 558,481 Number of extensions: 381 Number of successful extensions: 61 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |