Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_001035292 17 4312 XP_005262827 17 4312 XP_006714170 17 4312 XP_006714169 17 4312 XP_006714168 17 4312 XP_005262826 17 4312 XP_006714167 17 4312 NP_114475 17 4312 NP_061742 17 4312 NP_009220 16 5631 NP_000893 16 5631 NP_009218 16 5631 NP_009219 16 5631 NP_997191 16 5631 NP_055859 16 5631 NP_001152956 16 5631 XP_006717968 16 5631 XP_006717967 16 5631 XP_006717966 16 5631 XP_006717965 16 5631 XP_006713710 16 5631 XP_006713709 16 5631 XP_006711682 16 5631 NP_001004297 16 5631 NP_001601 16 7355 NP_005344 16 7355 XP_005253041 16 7355 NP_115495 15 9605 NP_055513 15 9605 NP_001188406 15 9605 NP_060562 15 9605 NP_001184216 15 9605 NP_001005491 15 9605 XP_006721355 15 9605 XP_006721354 15 9605 XP_006721353 15 9605 XP_006721352 15 9605 XP_006711904 15 9605 NP_001013372 15 9605 NP_001005239 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2595 QALLLTVLA 2603>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2616 QALLLTVLA 2624>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2626 QALLLTVLA 2634>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2626 QALLLTVLA 2634>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2595 QALLLTVLA 2603>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2605 QALLLTVLA 2613>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2626 QALLLTVLA 2634>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2613 QALLLTVLA 2621>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2616 QALLLTVLA 2624>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q LLLTVLA Sbjct: 2626 QALLLTVLA 2634>NP_001035292 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_005262827 Length = 269 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_006714170 Length = 274 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_006714169 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_006714168 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_005262826 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>XP_006714167 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 QV L+TVLA Sbjct: 172 QVYLITVLA 180>NP_114475 Length = 818 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 QVLLLT+L Sbjct: 13 QVLLLTLL 20>NP_061742 Length = 932 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 QVLLLT+L Sbjct: 13 QVLLLTLL 20>NP_009220 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>NP_000893 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>NP_009218 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>NP_009219 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>NP_997191 Length = 1888 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q+LLLT+ A Sbjct: 1812 QILLLTLFA 1820>NP_055859 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QVLLLTVLA 9 QVLLLT+++ Sbjct: 515 QVLLLTMMS 523>NP_001152956 Length = 1736 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q+LLLT+ A Sbjct: 1660 QILLLTLFA 1668>XP_006717968 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 ++LLTVLA Sbjct: 504 IILLTVLA 511>XP_006717967 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 ++LLTVLA Sbjct: 504 IILLTVLA 511>XP_006717966 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 ++LLTVLA Sbjct: 504 IILLTVLA 511>XP_006717965 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 ++LLTVLA Sbjct: 510 IILLTVLA 517>XP_006713710 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>XP_006713709 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLLT++A Sbjct: 35 VLLLTIIA 42>XP_006711682 Length = 1739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 Q+LLLT+ A Sbjct: 1663 QILLLTLFA 1671>NP_001004297 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QVLLLTVLA 9 ++LLLTV+A Sbjct: 129 ELLLLTVMA 137>NP_001601 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VLLLTVL 8 VLLLTVL Sbjct: 397 VLLLTVL 403>NP_005344 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLLLTVLA 9 VLLL+VLA Sbjct: 6 VLLLSVLA 13>XP_005253041 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 VLLLTVL 8 VLLLTVL Sbjct: 210 VLLLTVL 216>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QVLLLTVLA 9 Q LLL VLA Sbjct: 2301 QTLLLEVLA 2309>NP_055513 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLLLTVL 8 VLLLT+L Sbjct: 703 VLLLTIL 709>NP_001188406 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>NP_060562 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>NP_001184216 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 + LLLTV+A Sbjct: 126 ECLLLTVMA 134>NP_001005491 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 + LLLTV+A Sbjct: 102 ECLLLTVMA 110>XP_006721355 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>XP_006721354 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>XP_006721353 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>XP_006721352 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVLLLTVL 8 +VLL+TVL Sbjct: 11 KVLLITVL 18>XP_006711904 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLLLTVL 8 VLLLT+L Sbjct: 526 VLLLTIL 532>NP_001013372 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 + LLLTV+A Sbjct: 126 ECLLLTVMA 134>NP_001005239 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVLLLTVLA 9 + LLLTV+A Sbjct: 126 ECLLLTVMA 134Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.148 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,070 Number of extensions: 436 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |