Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 NP_005091 17 3301 NP_653080 17 3301 NP_001129735 17 3301 XP_006722712 17 3301 XP_005267292 17 3301 XP_005267291 17 3301 XP_005267290 17 3301 NP_858042 17 4312 NP_858041 17 4312 NP_065103 16 7355 NP_660305 16 7355 NP_054895 16 7355 XP_006713041 16 7355 NP_001278253 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001139806 15 9605 XP_006722053 15 9605 XP_006722052 15 9605 XP_006715737 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 1084 QVRMLAAES 1092>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 736 QVRMLAAES 744>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 1078 QVRMLAAES 1086>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 1084 QVRMLAAES 1092>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 1084 QVRMLAAES 1092>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 QV MLAAES Sbjct: 1084 QVRMLAAES 1092>NP_005091 Length = 1782 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVHMLAA 7 QVHM+AA Sbjct: 888 QVHMMAA 894>NP_653080 Length = 1684 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVHMLAA 7 QVHM+AA Sbjct: 790 QVHMMAA 796>NP_001129735 Length = 421 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVHMLAAE 8 +VH+LAAE Sbjct: 323 RVHLLAAE 330>XP_006722712 Length = 446 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QVHMLAAE 8 +VH+LAAE Sbjct: 323 RVHLLAAE 330>XP_005267292 Length = 1677 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVHMLAA 7 QVHM+AA Sbjct: 783 QVHMMAA 789>XP_005267291 Length = 1684 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVHMLAA 7 QVHM+AA Sbjct: 790 QVHMMAA 796>XP_005267290 Length = 1782 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QVHMLAA 7 QVHM+AA Sbjct: 888 QVHMMAA 894>NP_858042 Length = 75 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 +VHMLA +S Sbjct: 14 RVHMLALDS 22>NP_858041 Length = 97 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QVHMLAAES 9 +VHMLA +S Sbjct: 14 RVHMLALDS 22>NP_065103 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VHMLAA 7 VHMLAA Sbjct: 351 VHMLAA 356>NP_660305 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 Q+H LAAE Sbjct: 373 QLHELAAE 380>NP_054895 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 ++HMLA E Sbjct: 10 ELHMLATE 17>XP_006713041 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 Q+H LAAE Sbjct: 246 QLHELAAE 253>NP_001278253 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 Q H++AAE Sbjct: 547 QQHLMAAE 554>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 6049 KVHELAAE 6056>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 6174 KVHELAAE 6181>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 13473 KVHELAAE 13480>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 12546 KVHELAAE 12553>NP_001139806 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QVHMLAAE 8 QVH AAE Sbjct: 1475 QVHKAAAE 1482>XP_006722053 Length = 2608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 Q H++AAE Sbjct: 547 QQHLMAAE 554>XP_006722052 Length = 2631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 Q H++AAE Sbjct: 547 QQHLMAAE 554>XP_006715737 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QVHMLAAE 8 QVH AAE Sbjct: 1262 QVHKAAAE 1269>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 1786 KVHELAAE 1793>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 3145 KVHELAAE 3152>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 13101 KVHELAAE 13108>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 14607 KVHELAAE 14614>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 15114 KVHELAAE 15121>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QVHMLAAE 8 +VH LAAE Sbjct: 6241 KVHELAAE 6248Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.113 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,792 Number of extensions: 243 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |