Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_071900 16 5631 XP_006714967 16 5631 XP_006714966 16 5631 XP_006714964 16 5631 XP_005266016 16 5631 NP_001093321 16 7355 NP_001038945 16 7355 NP_006176 16 7355 NP_001273490 16 7355 XP_006723005 16 7355 XP_006718633 16 7355 XP_006718632 16 7355 XP_006718631 16 7355 XP_006718630 16 7355 XP_006718629 16 7355 XP_006718628 16 7355 XP_006718627 16 7355 XP_006718626 16 7355 XP_006718625 16 7355 NP_001273988 15 9605 NP_056153 15 9605 NP_055867 15 9605 NP_000370 15 9605 NP_005135 15 9605 NP_060881 15 9605 NP_055315 15 9605 NP_001153566 15 9605 NP_060943 15 9605 NP_065811 15 9605 NP_060899 15 9605 XP_006725524 15 9605 XP_006725523 15 9605 XP_005276828 15 9605 XP_006726279 15 9605 XP_005262461 15 9605 XP_006723795 15 9605 XP_006723794 15 9605 XP_006723793 15 9605 XP_006723792 15 9605 XP_006723791 15 9605 XP_006723790 15 9605 XP_006716430 15 9605 XP_005273626 15 9605 XP_006715736 15 9605 XP_006715735 15 9605 XP_005249722 15 9605 XP_006715734 15 9605 XP_006715733 15 9605 XP_006715608 15 9605 XP_005248815 15 9605 XP_006714722 15 9605 XP_006714721 15 9605 XP_006712712 15 9605 XP_006712711 15 9605 XP_006712710 15 9605 XP_006712709 15 9605 NP_001156752 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 QVEETST A Sbjct: 1176 QVEETSTYA 1184>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 QVEETST A Sbjct: 971 QVEETSTYA 979>NP_071900 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EETSTNA 9 EET TNA Sbjct: 185 EETQTNA 191>XP_006714967 Length = 1327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EETSTNA 9 EET TNA Sbjct: 185 EETQTNA 191>XP_006714966 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EETSTNA 9 EET TNA Sbjct: 185 EETQTNA 191>XP_006714964 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EETSTNA 9 EET TNA Sbjct: 185 EETQTNA 191>XP_005266016 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EETSTNA 9 EET TNA Sbjct: 185 EETQTNA 191>NP_001093321 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSTNA 9 ETSTNA Sbjct: 388 ETSTNA 393>NP_001038945 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETSTNA 9 ETSTNA Sbjct: 388 ETSTNA 393>NP_006176 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>NP_001273490 Length = 2101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006723005 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VEETSTN 8 VEE STN Sbjct: 212 VEENSTN 218>XP_006718633 Length = 2101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718632 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718631 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718630 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718629 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718628 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718627 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718626 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>XP_006718625 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 Q+E TST A Sbjct: 1347 QLEHTSTQA 1355>NP_001273988 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1563 VEETST 1568>NP_056153 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 127 LDETSSNA 134>NP_055867 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1597 VEETST 1602>NP_000370 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VEETSTN 8 + ETSTN Sbjct: 1064 ISETSTN 1070>NP_005135 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 Q E+T+TN+ Sbjct: 528 QEEDTATNS 536>NP_060881 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 Q E+T+TN+ Sbjct: 528 QEEDTATNS 536>NP_055315 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QVEETS 6 QVEETS Sbjct: 354 QVEETS 359>NP_001153566 Length = 117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 +VEE TNA Sbjct: 20 KVEEEHTNA 28>NP_060943 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QVEETSTNA 9 +VEE TNA Sbjct: 43 KVEEEHTNA 51>NP_065811 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1563 VEETST 1568>NP_060899 Length = 2624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_006725524 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_006725523 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_005276828 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_006726279 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_005262461 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QVEETS 6 QVEETS Sbjct: 354 QVEETS 359>XP_006723795 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 117 LDETSSNA 124>XP_006723794 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 127 LDETSSNA 134>XP_006723793 Length = 1513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 99 LDETSSNA 106>XP_006723792 Length = 1513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 99 LDETSSNA 106>XP_006723791 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 117 LDETSSNA 124>XP_006723790 Length = 1540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VEETSTNA 9 ++ETS+NA Sbjct: 126 LDETSSNA 133>XP_006716430 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 Q E+T+TN+ Sbjct: 528 QEEDTATNS 536>XP_005273626 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QVEETSTNA 9 Q E+T+TN+ Sbjct: 528 QEEDTATNS 536>XP_006715736 Length = 1573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1564 VEETST 1569>XP_006715735 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1597 VEETST 1602>XP_005249722 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1598 VEETST 1603>XP_006715734 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1598 VEETST 1603>XP_006715733 Length = 1608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1599 VEETST 1604>XP_006715608 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QVEETS 6 QVEETS Sbjct: 12 QVEETS 17>XP_005248815 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QVEETS 6 QVEETS Sbjct: 12 QVEETS 17>XP_006714722 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_006714721 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QVEETSTN 8 ++EETST+ Sbjct: 1322 ELEETSTS 1329>XP_006712712 Length = 1414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1405 VEETST 1410>XP_006712711 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1439 VEETST 1444>XP_006712710 Length = 1528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1519 VEETST 1524>XP_006712709 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VEETST 7 VEETST Sbjct: 1570 VEETST 1575>NP_001156752 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QVEETS 6 QVEETS Sbjct: 354 QVEETS 359Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.274 0.0915 0.200 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,771 Number of extensions: 504 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |