Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_694540 18 1135 NP_001265552 18 1135 NP_001265553 18 1135 NP_001728 18 1482 NP_001271324 17 2528 NP_064597 17 2528 NP_722576 17 2528 XP_005262424 17 2528 XP_006720681 17 2528 XP_006720680 17 2528 XP_006720679 17 2528 XP_006720678 17 2528 XP_006720677 17 2528 NP_004716 16 5631 NP_001007794 16 5631 NP_940968 16 7355 XP_006714536 16 7355 NP_001230075 15 9605 NP_002524 15 9605 NP_001230076 15 9605 NP_001277197 15 9605 NP_001035947 15 9605 NP_071890 15 9605 NP_543019 15 9605 NP_996671 15 9605 XP_006723776 15 9605 XP_005260351 15 9605 XP_006715987 15 9605 XP_005250031 15 9605 XP_005250029 15 9605 XP_005250028 15 9605 XP_005250027 15 9605 XP_006711841 15 9605 XP_006711840 15 9605 XP_006711839 15 9605 XP_006711838 15 9605 XP_006711837 15 9605 XP_006711836 15 9605 XP_006711835 15 9605 NP_006340 15 9605>NP_694540 Length = 911 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QTRCIKMR 8 +T+C+KMR Sbjct: 467 ETKCVKMR 474>NP_001265552 Length = 911 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QTRCIKMR 8 +T+C+KMR Sbjct: 467 ETKCVKMR 474>NP_001265553 Length = 911 Score = 18.5 bits (36), Expect = 1135 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QTRCIKMR 8 +T+C+KMR Sbjct: 467 ETKCVKMR 474>NP_001728 Length = 559 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RCIKMRM 9 RCIKMR+ Sbjct: 111 RCIKMRL 117>NP_001271324 Length = 658 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>NP_064597 Length = 686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>NP_722576 Length = 3080 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRCIK Sbjct: 2411 QTRCIK 2416>XP_005262424 Length = 2875 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRCIK Sbjct: 2206 QTRCIK 2211>XP_006720681 Length = 468 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>XP_006720680 Length = 608 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>XP_006720679 Length = 681 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>XP_006720678 Length = 696 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>XP_006720677 Length = 725 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT CIKM + Sbjct: 193 QTTCIKMEI 201>NP_004716 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRCI+ Sbjct: 181 QTRCIR 186>NP_001007794 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRCI+ Sbjct: 181 QTRCIR 186>NP_940968 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 CIKMRM 9 C+KMR+ Sbjct: 420 CVKMRL 425>XP_006714536 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 CIKMRM 9 C+KMR+ Sbjct: 306 CVKMRL 311>NP_001230075 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 256 QTLCRKLRL 264>NP_002524 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 445 QTLCRKLRL 453>NP_001230076 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 354 QTLCRKLRL 362>NP_001277197 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRC++ Sbjct: 125 QTRCVE 130>NP_001035947 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>NP_071890 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>NP_543019 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRC++ Sbjct: 121 QTRCVE 126>NP_996671 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 339 QTLCRKLRL 347>XP_006723776 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRC++ Sbjct: 120 QTRCVE 125>XP_005260351 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 QTRC++ Sbjct: 125 QTRCVE 130>XP_006715987 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250031 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 47 TKCLKM 52>XP_005250029 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250028 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250027 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 TRCIKM 7 T+C+KM Sbjct: 102 TKCLKM 107>XP_006711841 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 181 QTLCRKLRL 189>XP_006711840 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 229 QTLCRKLRL 237>XP_006711839 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 445 QTLCRKLRL 453>XP_006711838 Length = 728 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 445 QTLCRKLRL 453>XP_006711837 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 327 QTLCRKLRL 335>XP_006711836 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 327 QTLCRKLRL 335>XP_006711835 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QTRCIKMRM 9 QT C K+R+ Sbjct: 445 QTLCRKLRL 453>NP_006340 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 QTRCIK 6 +TRC+K Sbjct: 146 ETRCLK 151Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.135 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,558 Number of extensions: 439 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |