Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 509 NP_001161879 17 4312 NP_055804 17 4312 NP_919269 17 4312 XP_006715455 17 4312 XP_006715452 17 4312 XP_006715451 17 4312 XP_006715450 17 4312 XP_005248745 17 4312 XP_005248744 17 4312 XP_005248743 17 4312 XP_005248742 17 4312 XP_006715449 17 4312 XP_006715448 17 4312 XP_006715447 17 4312 XP_006715446 17 4312 XP_005264966 17 4312 XP_006710433 16 5631 XP_006710432 16 5631 XP_006710431 16 5631 XP_006710430 16 5631 XP_006710429 16 5631 NP_001009811 16 7355 NP_055799 16 7355 NP_001277251 16 7355 NP_005500 16 7355 NP_001277250 16 7355 NP_689870 16 7355 NP_005928 16 7355 NP_068591 16 7355 NP_060529 16 7355 NP_001129509 16 7355 XP_006725391 16 7355 XP_006725390 16 7355 XP_006725389 16 7355 XP_006725388 16 7355 XP_006725387 16 7355 XP_005258676 16 7355 XP_005257438 16 7355 XP_005257437 16 7355 XP_006721974 16 7355 XP_006721973 16 7355 XP_005257436 16 7355 XP_005257233 16 7355 XP_005257231 16 7355 XP_005271970 16 7355 XP_005271969 16 7355 XP_005271967 16 7355 XP_005271966 16 7355 NP_114096 16 7355 NP_004200 15 9605 NP_003681 15 9605 NP_001132990 15 9605 NP_001132989 15 9605 NP_937870 15 9605 NP_937872 15 9605 XP_006715629 15 9605 XP_006713970 15 9605 XP_006713968 15 9605 XP_005246978 15 9605 NP_078970 15 9605>NP_115803 Length = 1156 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QTGSGASQA 9 QTGSGAS+A Sbjct: 415 QTGSGASRA 423>NP_001161879 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 626 TGSGSSQ 632>NP_055804 Length = 1692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1306 TGSGSSQ 1312>NP_919269 Length = 1843 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 QTG G+SQ Sbjct: 1753 QTGPGSSQ 1760>XP_006715455 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 88 TGSGSSQ 94>XP_006715452 Length = 1474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1088 TGSGSSQ 1094>XP_006715451 Length = 1475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1098 TGSGSSQ 1104>XP_006715450 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1112 TGSGSSQ 1118>XP_005248745 Length = 1515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1129 TGSGSSQ 1135>XP_005248744 Length = 1519 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1133 TGSGSSQ 1139>XP_005248743 Length = 1525 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1139 TGSGSSQ 1145>XP_005248742 Length = 1535 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1149 TGSGSSQ 1155>XP_006715449 Length = 1539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1153 TGSGSSQ 1159>XP_006715448 Length = 1549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1163 TGSGSSQ 1169>XP_006715447 Length = 1574 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1188 TGSGSSQ 1194>XP_006715446 Length = 1574 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSG+SQ Sbjct: 1188 TGSGSSQ 1194>XP_005264966 Length = 1843 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 QTG G+SQ Sbjct: 1753 QTGPGSSQ 1760>XP_006710433 Length = 1169 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710432 Length = 1202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710431 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710430 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710429 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGSGASQ 8 TGSGAS+ Sbjct: 277 TGSGASR 283>NP_001009811 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TGSGASQA 9 TG G SQA Sbjct: 62 TGPGGSQA 69>NP_055799 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TGSGASQA 9 TG G SQA Sbjct: 62 TGPGGSQA 69>NP_001277251 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2558 QTGRGAS 2564>NP_005500 Length = 3027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2731 QTGRGAS 2737>NP_001277250 Length = 3048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2752 QTGRGAS 2758>NP_689870 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSGASQ 8 GSGASQ Sbjct: 566 GSGASQ 571>NP_005928 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 433 TGSGAS 438>NP_068591 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QTGSGASQ 8 Q G GASQ Sbjct: 164 QPGDGASQ 171>NP_060529 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSGASQ 8 GSGASQ Sbjct: 823 GSGASQ 828>NP_001129509 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGSGASQA 9 TGSGA+ A Sbjct: 13 TGSGAAPA 20>XP_006725391 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 460 TGSGAS 465>XP_006725390 Length = 1004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 344 TGSGAS 349>XP_006725389 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 407 TGSGAS 412>XP_006725388 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 434 TGSGAS 439>XP_006725387 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 460 TGSGAS 465>XP_005258676 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSGASQ 8 GSGASQ Sbjct: 566 GSGASQ 571>XP_005257438 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 460 TGSGAS 465>XP_005257437 Length = 1004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 344 TGSGAS 349>XP_006721974 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 407 TGSGAS 412>XP_006721973 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 434 TGSGAS 439>XP_005257436 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 460 TGSGAS 465>XP_005257233 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TGSGASQA 9 TG G SQA Sbjct: 62 TGPGGSQA 69>XP_005257231 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TGSGASQA 9 TG G SQA Sbjct: 62 TGPGGSQA 69>XP_005271970 Length = 2931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2790 QTGRGAS 2796>XP_005271969 Length = 3020 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2724 QTGRGAS 2730>XP_005271967 Length = 3065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2769 QTGRGAS 2775>XP_005271966 Length = 3086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QTGSGAS 7 QTG GAS Sbjct: 2790 QTGRGAS 2796>NP_114096 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TGSGAS 7 TGSGAS Sbjct: 162 TGSGAS 167>NP_004200 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QTGSGASQA 9 Q +GASQA Sbjct: 184 QLSTGASQA 192>NP_003681 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 +TG GAS+ Sbjct: 170 ETGKGASK 177>NP_001132990 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 +TG GAS+ Sbjct: 145 ETGKGASK 152>NP_001132989 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 +TG GAS+ Sbjct: 159 ETGKGASK 166>NP_937870 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QTGSGASQA 9 Q G G SQA Sbjct: 759 QAGPGRSQA 767>NP_937872 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QTGSGASQA 9 Q G G SQA Sbjct: 1407 QAGPGRSQA 1415>XP_006715629 Length = 1667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QTGSGAS 7 QTGSG++ Sbjct: 1464 QTGSGSA 1470>XP_006713970 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QTGSGASQA 9 Q G G SQA Sbjct: 606 QAGPGRSQA 614>XP_006713968 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QTGSGASQA 9 Q G G SQA Sbjct: 1407 QAGPGRSQA 1415>XP_005246978 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QTGSGASQ 8 +TG GAS+ Sbjct: 57 ETGKGASK 64>NP_078970 Length = 1667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QTGSGAS 7 QTGSG++ Sbjct: 1464 QTGSGSA 1470Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.285 0.0997 0.243 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 633,742 Number of extensions: 676 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |