Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1482 NP_001075109 18 1482 NP_001171886 18 1482 NP_115513 18 1482 NP_001171887 18 1482 XP_006713407 18 1482 XP_006713406 18 1482 XP_006713405 18 1482 XP_006713404 18 1482 NP_004466 16 5631 NP_002009 16 5631 NP_079032 16 5631 NP_001243193 16 5631 NP_001243194 16 5631 XP_006721915 16 5631 XP_005258010 16 5631 XP_005258009 16 5631 XP_005258007 16 5631 XP_005256615 16 5631 XP_005256613 16 5631 XP_005256612 16 5631 XP_005270210 16 5631 XP_006718033 16 5631 NP_055418 16 5631 NP_001129111 16 7355 NP_001288 16 7355 NP_001273059 16 7355 NP_055898 16 7355 NP_057591 16 7355 NP_671725 16 7355 NP_757379 16 7355 NP_055833 16 7355 NP_001186871 16 7355 NP_001180438 16 7355 NP_060205 16 7355 NP_932157 16 7355 XP_005257515 16 7355 XP_005257513 16 7355 XP_006721197 16 7355 XP_006715463 16 7355 XP_006715462 16 7355 XP_006715461 16 7355 XP_006715460 16 7355 XP_006715459 16 7355 XP_006715458 16 7355 XP_006715457 16 7355 XP_006715456 16 7355 XP_005248379 16 7355 XP_005248378 16 7355 XP_005264473 16 7355 XP_006710466 16 7355 XP_005270625 16 7355 XP_006710418 16 7355 NP_060610 16 7355 NP_004076 15 9605 NP_001139423 15 9605 NP_003679 15 9605 NP_001119526 15 9605 NP_001119527 15 9605 NP_003553 15 9605 NP_001158889 15 9605 XP_005262149 15 9605 XP_006724629 15 9605 XP_006724628 15 9605 XP_005272743 15 9605>NP_008835 Length = 4128 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QSV ALTEI Sbjct: 3130 QSVQALTEI 3138>NP_001075109 Length = 4097 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QSV ALTEI Sbjct: 3130 QSVQALTEI 3138>NP_001171886 Length = 782 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 18 QSIHLLTEL 26>NP_115513 Length = 904 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 140 QSIHLLTEL 148>NP_001171887 Length = 782 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 18 QSIHLLTEL 26>XP_006713407 Length = 648 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 140 QSIHLLTEL 148>XP_006713406 Length = 669 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 140 QSIHLLTEL 148>XP_006713405 Length = 947 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 140 QSIHLLTEL 148>XP_006713404 Length = 947 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 QS+H LTE+ Sbjct: 140 QSIHLLTEL 148>NP_004466 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVHALTEI 9 SVHALT + Sbjct: 405 SVHALTGV 412>NP_002009 Length = 1269 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 357 EAIHFLTEI 365>NP_079032 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QSVHALTE 8 QS+H+LT+ Sbjct: 250 QSLHSLTQ 257>NP_001243193 Length = 1258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 346 EAIHFLTEI 354>NP_001243194 Length = 1214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 303 EAIHFLTEI 311>XP_006721915 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QSVHALTE 8 Q +H LTE Sbjct: 110 QKIHGLTE 117>XP_005258010 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVHALTEI 9 SVHALT + Sbjct: 328 SVHALTGV 335>XP_005258009 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVHALTEI 9 SVHALT + Sbjct: 356 SVHALTGV 363>XP_005258007 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVHALTEI 9 SVHALT + Sbjct: 405 SVHALTGV 412>XP_005256615 Length = 1268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 357 EAIHFLTEI 365>XP_005256613 Length = 1295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 357 EAIHFLTEI 365>XP_005256612 Length = 1296 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QSVHALTEI 9 +++H LTEI Sbjct: 357 EAIHFLTEI 365>XP_005270210 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QSVHALTE 8 QS+H+LT+ Sbjct: 189 QSLHSLTQ 196>XP_006718033 Length = 888 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QSVHALTE 8 QS+H+LT+ Sbjct: 189 QSLHSLTQ 196>NP_055418 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QSVHALTE 8 Q +H LTE Sbjct: 110 QKIHGLTE 117>NP_001129111 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_001288 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_001273059 Length = 1245 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 Q VH++TE Sbjct: 116 QPVHSITE 123>NP_055898 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 QS+ ALTE Sbjct: 1155 QSISALTE 1162>NP_057591 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 QS+ ALTE Sbjct: 1155 QSISALTE 1162>NP_671725 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 40 SVHALT 45>NP_757379 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 40 SVHALT 45>NP_055833 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2034 SVHALT 2039>NP_001186871 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2025 SVHALT 2030>NP_001180438 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VHALTEI 9 VH LTE+ Sbjct: 310 VHTLTEV 316>NP_060205 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VHALTEI 9 VH LTE+ Sbjct: 360 VHTLTEV 366>NP_932157 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 VHALT++ Sbjct: 525 VHALTDL 531>XP_005257515 Length = 1256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 QS+ ALTE Sbjct: 1155 QSISALTE 1162>XP_005257513 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 QS+ ALTE Sbjct: 1154 QSISALTE 1161>XP_006721197 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 Q VH++TE Sbjct: 116 QPVHSITE 123>XP_006715463 Length = 2434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715462 Length = 2452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2001 SVHALT 2006>XP_006715461 Length = 2456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2025 SVHALT 2030>XP_006715460 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715459 Length = 2475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2024 SVHALT 2029>XP_006715458 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2025 SVHALT 2030>XP_006715457 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2034 SVHALT 2039>XP_006715456 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 2034 SVHALT 2039>XP_005248379 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 +HALTE+ Sbjct: 47 LHALTEL 53>XP_005248378 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 +HALTE+ Sbjct: 97 LHALTEL 103>XP_005264473 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VHALTEI 9 VH LTE+ Sbjct: 360 VHTLTEV 366>XP_006710466 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 VHALT++ Sbjct: 24 VHALTDL 30>XP_005270625 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 VHALT++ Sbjct: 33 VHALTDL 39>XP_006710418 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVHALT 7 SVHALT Sbjct: 40 SVHALT 45>NP_060610 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VHALTEI 9 +HALTE+ Sbjct: 97 LHALTEL 103>NP_004076 Length = 97 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSVHALTEI 9 Q VH +TE+ Sbjct: 34 QLVHQMTEL 42>NP_001139423 Length = 48 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSVHALTEI 9 Q VH +TE+ Sbjct: 34 QLVHQMTEL 42>NP_003679 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 355 EEIHALTD 362>NP_001119526 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 355 EEIHALTD 362>NP_001119527 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 349 EEIHALTD 356>NP_003553 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVHALTEI 9 S HALT I Sbjct: 64 SFHALTSI 71>NP_001158889 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SVHALTEI 9 S HALT I Sbjct: 53 SFHALTSI 60>XP_005262149 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QSVHALTEI 9 Q VH +TE+ Sbjct: 34 QLVHQMTEL 42>XP_006724629 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 349 EEIHALTD 356>XP_006724628 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 349 EEIHALTD 356>XP_005272743 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QSVHALTE 8 + +HALT+ Sbjct: 349 EEIHALTD 356Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.120 0.302 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,073 Number of extensions: 717 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |