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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005742                                                              20     509
NP_671714                                                              20     509
XP_006715890                                                           20     509
XP_005250160                                                           20     509
XP_005250159                                                           20     509
NP_001091981                                                           16    5631
NP_001230881                                                           16    5631
NP_004511                                                              16    5631
NP_001230882                                                           16    5631
NP_219479                                                              16    5631
XP_006726466                                                           16    5631
XP_006712969                                                           16    5631
XP_006710208                                                           16    5631
NP_056082                                                              16    7355
XP_006719362                                                           16    7355
NP_060719                                                              15    9605
NP_001258968                                                           15    9605
NP_116056                                                              15    9605
NP_001124174                                                           15    9605
NP_001116427                                                           15    9605
NP_001011649                                                           15    9605
XP_006717248                                                           15    9605
XP_006717247                                                           15    9605
XP_006717246                                                           15    9605
XP_006717245                                                           15    9605
XP_006717244                                                           15    9605
XP_006717243                                                           15    9605
XP_006717242                                                           15    9605
NP_001156386                                                           15    9605

>NP_005742
          Length = 3907

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    QSQMLEMEV 9
            QSQMLEM+V
Sbjct: 3130 QSQMLEMQV 3138



>NP_671714
          Length = 3899

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    QSQMLEMEV 9
            QSQMLEM+V
Sbjct: 3122 QSQMLEMQV 3130



>XP_006715890
          Length = 3860

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    QSQMLEMEV 9
            QSQMLEM+V
Sbjct: 3083 QSQMLEMQV 3091



>XP_005250160
          Length = 3939

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    QSQMLEMEV 9
            QSQMLEM+V
Sbjct: 3162 QSQMLEMQV 3170



>XP_005250159
          Length = 3952

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    QSQMLEMEV 9
            QSQMLEM+V
Sbjct: 3175 QSQMLEMQV 3183



>NP_001091981
          Length = 744

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SQMLEME 8
           SQM+EME
Sbjct: 653 SQMVEME 659



>NP_001230881
          Length = 686

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SQMLEME 8
           SQM+EME
Sbjct: 595 SQMVEME 601



>NP_004511
          Length = 706

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SQMLEME 8
           SQM+EME
Sbjct: 615 SQMVEME 621



>NP_001230882
          Length = 687

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   SQMLEME 8
           SQM+EME
Sbjct: 596 SQMVEME 602



>NP_219479
          Length = 292

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  QSQMLEMEV 9
          Q Q+LEME+
Sbjct: 10 QLQLLEMEM 18



>XP_006726466
          Length = 1310

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    QSQMLEME 8
            Q+QM EME
Sbjct: 1222 QAQMTEME 1229



>XP_006712969
          Length = 1310

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    QSQMLEME 8
            Q+QM EME
Sbjct: 1222 QAQMTEME 1229



>XP_006710208
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   QSQMLEME 8
           Q+QM EME
Sbjct: 578 QAQMTEME 585



>NP_056082
          Length = 1486

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QSQMLEMEV 9
           Q  +LEMEV
Sbjct: 708 QQALLEMEV 716



>XP_006719362
          Length = 1546

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QSQMLEMEV 9
           Q  +LEMEV
Sbjct: 768 QQALLEMEV 776



>NP_060719
          Length = 1893

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 965 QSQILELQ 972



>NP_001258968
          Length = 1663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 735 QSQILELQ 742



>NP_116056
          Length = 398

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QSQMLEMEV 9
           Q Q+LE+E+
Sbjct: 175 QKQLLEVEL 183



>NP_001124174
          Length = 287

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QSQMLEMEV 9
           Q Q+LE+E+
Sbjct: 175 QKQLLEVEL 183



>NP_001116427
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QSQMLEMEV 9
           Q Q+LE+E+
Sbjct: 239 QKQLLEVEL 247



>NP_001011649
          Length = 1814

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 965 QSQILELQ 972



>XP_006717248
          Length = 1664

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 736 QSQILELQ 743



>XP_006717247
          Length = 1670

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 736 QSQILELQ 743



>XP_006717246
          Length = 1820

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 965 QSQILELQ 972



>XP_006717245
          Length = 1861

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 933 QSQILELQ 940



>XP_006717244
          Length = 1867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 933 QSQILELQ 940



>XP_006717243
          Length = 1889

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 955 QSQILELQ 962



>XP_006717242
          Length = 1898

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           QSQ+LE++
Sbjct: 964 QSQILELQ 971



>NP_001156386
          Length = 439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QSQMLEME 8
           ++Q+LEME
Sbjct: 124 RAQLLEME 131



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.307    0.114    0.251 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 389,978
Number of extensions: 577
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)