Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_002068 17 4312 XP_006717126 17 4312 XP_005251986 17 4312 XP_006717125 17 4312 NP_055625 16 7355 NP_065875 16 7355 XP_005252604 16 7355 XP_005252603 16 7355 XP_005252601 16 7355 XP_006717551 16 7355 XP_005252600 16 7355 XP_005252599 16 7355 XP_006717550 16 7355 XP_006711734 16 7355 XP_006711733 16 7355 XP_006711732 16 7355 XP_006711731 16 7355 XP_006711730 16 7355 XP_006711729 16 7355 XP_005245695 16 7355 NP_001229658 15 9605 NP_055888 15 9605 NP_065829 15 9605 NP_689475 15 9605 XP_006723175 15 9605 XP_005258729 15 9605 XP_005258728 15 9605 XP_006722996 15 9605 XP_005260201 15 9605 XP_005260199 15 9605 XP_006714307 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 109 QRSVSEES 116>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 109 QRSVSEES 116>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QRSVSEES 8 QRSVSEES Sbjct: 110 QRSVSEES 117>NP_002068 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSVSEESV 9 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_006717126 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSVSEESV 9 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_005251986 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSVSEESV 9 RSVS+ESV Sbjct: 27 RSVSKESV 34>XP_006717125 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RSVSEESV 9 RSVS+ESV Sbjct: 27 RSVSKESV 34>NP_055625 Length = 3117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2177 ERSVSERSL 2185>NP_065875 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_005252604 Length = 1386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_005252603 Length = 1457 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_005252601 Length = 1948 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 445 QRSVSQE 451>XP_006717551 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_005252600 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_005252599 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_006717550 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QRSVSEE 7 QRSVS+E Sbjct: 455 QRSVSQE 461>XP_006711734 Length = 3136 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2196 ERSVSERSL 2204>XP_006711733 Length = 3137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2197 ERSVSERSL 2205>XP_006711732 Length = 3154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2214 ERSVSERSL 2222>XP_006711731 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2217 ERSVSERSL 2225>XP_006711730 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2217 ERSVSERSL 2225>XP_006711729 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2218 ERSVSERSL 2226>XP_005245695 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRSVSEESV 9 +RSVSE S+ Sbjct: 2218 ERSVSERSL 2226>NP_001229658 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QRSVSEES 8 QRS EES Sbjct: 452 QRSTGEES 459>NP_055888 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRSVSEESV 9 QR++S+ES+ Sbjct: 1540 QRTLSDESL 1548>NP_065829 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSVSEES 8 RSVSE+S Sbjct: 288 RSVSEDS 294>NP_689475 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSVSEESV 9 RSV+EE V Sbjct: 79 RSVTEEKV 86>XP_006723175 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRSVSEESV 9 QR++S+ES+ Sbjct: 853 QRTLSDESL 861>XP_005258729 Length = 1780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRSVSEESV 9 QR++S+ES+ Sbjct: 1539 QRTLSDESL 1547>XP_005258728 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRSVSEESV 9 QR++S+ES+ Sbjct: 1540 QRTLSDESL 1548>XP_006722996 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSVSEESV 9 RSV+EE V Sbjct: 84 RSVTEEKV 91>XP_005260201 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSVSEESV 9 RSV+EE V Sbjct: 84 RSVTEEKV 91>XP_005260199 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RSVSEESV 9 RSV+EE V Sbjct: 84 RSVTEEKV 91>XP_006714307 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QRSVSEES 8 QRS EES Sbjct: 234 QRSTGEES 241Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.0992 0.204 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,299 Number of extensions: 513 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |