Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 390 NP_056019 17 4312 XP_006725002 17 4312 XP_006715725 17 4312 XP_006715724 17 4312 XP_006715723 17 4312 XP_006715722 17 4312 XP_005276117 17 4312 NP_775771 16 5631 NP_003102 16 5631 NP_001017371 16 5631 NP_001166183 16 5631 XP_006720466 16 5631 XP_005254230 16 5631 XP_006720465 16 5631 XP_005254228 16 5631 NP_005974 16 7355 NP_001230049 16 7355 NP_055325 16 7355 NP_149015 16 7355 XP_006715989 16 7355 XP_006714550 16 7355 NP_001804 15 9605 NP_653223 15 9605 NP_004527 15 9605 NP_001273663 15 9605 NP_075043 15 9605 NP_001186978 15 9605 NP_443111 15 9605 NP_115830 15 9605 NP_004188 15 9605 NP_954658 15 9605 XP_006725522 15 9605 XP_006725520 15 9605 XP_006725519 15 9605 XP_006725518 15 9605 XP_006725517 15 9605 XP_006725516 15 9605 XP_005276859 15 9605 XP_005276857 15 9605 XP_006726285 15 9605 XP_006726284 15 9605 XP_006726283 15 9605 XP_006726282 15 9605 XP_006719279 15 9605 XP_005268670 15 9605 XP_006719278 15 9605 XP_005248581 15 9605 XP_005248580 15 9605 XP_006714692 15 9605 XP_006714691 15 9605 XP_006714690 15 9605 XP_006714689 15 9605 XP_006714629 15 9605 XP_005271973 15 9605 NP_001164275 15 9605 NP_001164279 15 9605>NP_115927 Length = 1321 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRQVFSVVP 9 QRQVFSV P Sbjct: 660 QRQVFSVAP 668>NP_056019 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q QV+ VVP Sbjct: 1081 QAQVYEVVP 1089>XP_006725002 Length = 599 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRQVFSVVP 9 ++QVF++VP Sbjct: 248 EQQVFTLVP 256>XP_006715725 Length = 1516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q QV+ VVP Sbjct: 1081 QAQVYEVVP 1089>XP_006715724 Length = 1533 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q QV+ VVP Sbjct: 1081 QAQVYEVVP 1089>XP_006715723 Length = 1559 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q QV+ VVP Sbjct: 1081 QAQVYEVVP 1089>XP_006715722 Length = 1614 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q QV+ VVP Sbjct: 1081 QAQVYEVVP 1089>XP_005276117 Length = 599 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRQVFSVVP 9 ++QVF++VP Sbjct: 248 EQQVFTLVP 256>NP_775771 Length = 1244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 Q FSVVP Sbjct: 829 QTFSVVP 835>NP_003102 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQVFSVVP 9 +Q+FSV P Sbjct: 149 QQIFSVAP 156>NP_001017371 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQVFSVVP 9 +Q+FSV P Sbjct: 81 QQIFSVAP 88>NP_001166183 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQVFSVVP 9 +Q+FSV P Sbjct: 146 QQIFSVAP 153>XP_006720466 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 Q FSVVP Sbjct: 760 QTFSVVP 766>XP_005254230 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 Q FSVVP Sbjct: 760 QTFSVVP 766>XP_006720465 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 Q FSVVP Sbjct: 824 QTFSVVP 830>XP_005254228 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 Q FSVVP Sbjct: 835 QTFSVVP 841>NP_005974 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 QVF +VP Sbjct: 366 QVFGIVP 372>NP_001230049 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 QVF +VP Sbjct: 152 QVFGIVP 158>NP_055325 Length = 4935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSVVP Sbjct: 2619 VFSVVP 2624>NP_149015 Length = 5142 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSVVP Sbjct: 2619 VFSVVP 2624>XP_006715989 Length = 5148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSVVP Sbjct: 2619 VFSVVP 2624>XP_006714550 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 QVF +VP Sbjct: 321 QVFGIVP 327>NP_001804 Length = 2701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRQVFSVV 8 QR++FS++ Sbjct: 1042 QRKIFSLI 1049>NP_653223 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QVFSVVP 9 QVF V+P Sbjct: 249 QVFCVIP 255>NP_004527 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>NP_001273663 Length = 2580 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRQVFSVV 8 QR++FS++ Sbjct: 1017 QRKIFSLI 1024>NP_075043 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 955 VFSVIP 960>NP_001186978 Length = 2715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQVFSVV 8 RQ+FSV+ Sbjct: 214 RQIFSVM 220>NP_443111 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 316 QYSVYSIVP 324>NP_115830 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVFSVVP 9 QV+S+VP Sbjct: 174 QVYSLVP 180>NP_004188 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QVFSVVP 9 QV+S+VP Sbjct: 174 QVYSLVP 180>NP_954658 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 315 QYSVYSIVP 323>XP_006725522 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 479 VFSVIP 484>XP_006725520 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 729 VFSVIP 734>XP_006725519 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 853 VFSVIP 858>XP_006725518 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 933 VFSVIP 938>XP_006725517 Length = 1348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_006725516 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_005276859 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 479 VFSVIP 484>XP_005276857 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 729 VFSVIP 734>XP_006726285 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 853 VFSVIP 858>XP_006726284 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 933 VFSVIP 938>XP_006726283 Length = 1348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_006726282 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_006719279 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 316 QYSVYSIVP 324>XP_005268670 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 246 QYSVYSIVP 254>XP_006719278 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 316 QYSVYSIVP 324>XP_005248581 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 479 VFSVIP 484>XP_005248580 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 729 VFSVIP 734>XP_006714692 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 853 VFSVIP 858>XP_006714691 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 933 VFSVIP 938>XP_006714690 Length = 1348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_006714689 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VFSVVP 9 VFSV+P Sbjct: 1117 VFSVIP 1122>XP_006714629 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q+Q+FS P Sbjct: 155 QKQIFSPPP 163>XP_005271973 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q+Q+FS P Sbjct: 158 QKQIFSPPP 166>NP_001164275 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 316 QYSVYSIVP 324>NP_001164279 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQVFSVVP 9 Q V+S+VP Sbjct: 316 QYSVYSIVP 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.137 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,171 Number of extensions: 755 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |