Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_001277189 17 3301 NP_055968 17 3301 NP_689418 17 3301 NP_001241872 17 3301 NP_001129069 17 3301 NP_060554 17 3301 NP_001277188 17 3301 XP_005248759 17 3301 XP_006715489 17 3301 XP_005248758 17 3301 XP_005264483 17 3301 XP_005264480 17 3301 XP_005264478 17 3301 XP_005264475 17 3301 NP_001010872 17 4312 XP_006715085 17 4312 NP_001367 16 5631 NP_683692 16 5631 XP_005248208 16 5631 XP_005248207 16 5631 XP_006714021 16 5631 NP_690862 16 5631 NP_057427 16 7355 NP_056261 16 7355 XP_006722001 16 7355 XP_006722000 16 7355 XP_006721999 16 7355 XP_006721998 16 7355 XP_006721997 16 7355 XP_006721996 16 7355 XP_006721995 16 7355 XP_006711822 16 7355 XP_006711821 16 7355 NP_057423 16 7355 NP_940857 16 7355 NP_001009899 15 9605 NP_001008225 15 9605 NP_060473 15 9605 XP_005276807 15 9605 XP_005254586 15 9605 XP_005254585 15 9605 XP_005254584 15 9605 XP_005247266 15 9605 XP_005247265 15 9605 XP_005246759 15 9605 NP_065726 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQ ANLQD Sbjct: 329 QRQAANLQD 337>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQ ANLQD Sbjct: 395 QRQAANLQD 403>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQ ANLQD Sbjct: 395 QRQAANLQD 403>NP_001277189 Length = 736 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 463 ETANLQD 469>NP_055968 Length = 2039 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 463 ETANLQD 469>NP_689418 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QRQ N+QD Sbjct: 472 QRQLKNIQD 480>NP_001241872 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1086 QRQTVSLQE 1094>NP_001129069 Length = 1870 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1086 QRQTVSLQE 1094>NP_060554 Length = 1843 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1087 QRQTVSLQE 1095>NP_001277188 Length = 1951 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 375 ETANLQD 381>XP_005248759 Length = 1951 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 375 ETANLQD 381>XP_006715489 Length = 2039 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 463 ETANLQD 469>XP_005248758 Length = 2039 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +TANLQD Sbjct: 463 ETANLQD 469>XP_005264483 Length = 1311 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1087 QRQTVSLQE 1095>XP_005264480 Length = 1842 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1086 QRQTVSLQE 1094>XP_005264478 Length = 1844 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1087 QRQTVSLQE 1095>XP_005264475 Length = 2027 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQT +LQ+ Sbjct: 1087 QRQTVSLQE 1095>NP_001010872 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+T NL D Sbjct: 450 QRKTTNLAD 458>XP_006715085 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+T NL D Sbjct: 450 QRKTTNLAD 458>NP_001367 Length = 4646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QRQTANLQ 8 Q+Q ANLQ Sbjct: 1233 QQQVANLQ 1240>NP_683692 Length = 3051 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQTANLQD 9 ++TANLQ+ Sbjct: 2921 KETANLQE 2928>XP_005248208 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQTANLQD 9 ++TANLQ+ Sbjct: 2920 KETANLQE 2927>XP_005248207 Length = 3098 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQTANLQD 9 ++TANLQ+ Sbjct: 2921 KETANLQE 2928>XP_006714021 Length = 3112 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQTANLQD 9 ++TANLQ+ Sbjct: 2935 KETANLQE 2942>NP_690862 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRQTANLQD 9 QRQ AN+++ Sbjct: 102 QRQAANIRE 110>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QTANLQD 9 +T+NLQD Sbjct: 1246 ETSNLQD 1252>NP_056261 Length = 2275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 Q+Q NL+D Sbjct: 1383 QKQMGNLED 1391>XP_006722001 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 189 RRETANLE 196>XP_006722000 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 253 RRETANLE 260>XP_006721999 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721998 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721997 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 290 RRETANLE 297>XP_006721996 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 308 RRETANLE 315>XP_006721995 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 459 RRETANLE 466>XP_006711822 Length = 2266 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 Q+Q NL+D Sbjct: 1374 QKQMGNLED 1382>XP_006711821 Length = 2301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 Q+Q NL+D Sbjct: 1409 QKQMGNLED 1417>NP_057423 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRQTANLQ 8 +R+TANL+ Sbjct: 253 RRETANLE 260>NP_940857 Length = 5147 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QRQTANLQ 8 QRQ NLQ Sbjct: 4806 QRQECNLQ 4813>NP_001009899 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRQTANL 7 Q+QTAN+ Sbjct: 177 QKQTANV 183>NP_001008225 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+ N+QD Sbjct: 277 QREHQNIQD 285>NP_060473 Length = 1416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+ N+QD Sbjct: 290 QREHQNIQD 298>XP_005276807 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TANLQD 9 TAN+QD Sbjct: 175 TANIQD 180>XP_005254586 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+ N+QD Sbjct: 277 QREHQNIQD 285>XP_005254585 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+ N+QD Sbjct: 290 QREHQNIQD 298>XP_005254584 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRQTANLQD 9 QR+ N+QD Sbjct: 285 QREHQNIQD 293>XP_005247266 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRQTANL 7 Q+QTAN+ Sbjct: 121 QKQTANV 127>XP_005247265 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRQTANL 7 Q+QTAN+ Sbjct: 143 QKQTANV 149>XP_005246759 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TANLQD 9 TAN+QD Sbjct: 175 TANIQD 180>NP_065726 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TANLQD 9 TAN+QD Sbjct: 100 TANIQD 105Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.115 0.288 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,882 Number of extensions: 727 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |