Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 390 NP_005913 20 390 XP_005267046 20 390 XP_005267045 20 390 NP_000625 17 2528 NP_005092 17 4312 NP_699192 16 5631 NP_001243779 16 5631 NP_596869 16 5631 XP_006716298 16 5631 XP_006716297 16 5631 XP_006714514 16 5631 XP_006714513 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_001177203 16 7355 NP_005392 16 7355 NP_054889 16 7355 NP_055703 16 7355 NP_663771 16 7355 NP_620160 16 7355 NP_001035109 16 7355 NP_874362 16 7355 XP_006714215 16 7355 XP_006714214 16 7355 XP_005262915 16 7355 XP_006713030 16 7355 XP_006713029 16 7355 XP_005264921 16 7355 XP_005264920 16 7355 XP_006713028 16 7355 XP_005264919 16 7355 XP_005264631 16 7355 XP_005264630 16 7355 XP_005264629 16 7355 NP_055806 16 7355 NP_001078853 15 9605 NP_665682 15 9605 NP_663160 15 9605 NP_663162 15 9605 NP_056365 15 9605 NP_899243 15 9605 NP_663161 15 9605 NP_001188410 15 9605 NP_115912 15 9605 NP_001188411 15 9605 NP_001188409 15 9605 NP_665741 15 9605 XP_003403542 15 9605 XP_006723427 15 9605 XP_005257067 15 9605 XP_006720135 15 9605 XP_006720134 15 9605 XP_006720133 15 9605 XP_006715747 15 9605 XP_006715746 15 9605 XP_006715745 15 9605 XP_006715744 15 9605 XP_005249755 15 9605 XP_006713282 15 9605 XP_006713281 15 9605 XP_005265326 15 9605 XP_005265323 15 9605 XP_006712295 15 9605 XP_006712294 15 9605 XP_003403793 15 9605>NP_006715 Length = 1558 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRNNVGRSA 9 QRNNVGR A Sbjct: 100 QRNNVGRPA 108>NP_005913 Length = 1608 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRNNVGRSA 9 QRNNVGR A Sbjct: 100 QRNNVGRPA 108>XP_005267046 Length = 1554 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRNNVGRSA 9 QRNNVGR A Sbjct: 100 QRNNVGRPA 108>XP_005267045 Length = 1604 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRNNVGRSA 9 QRNNVGR A Sbjct: 100 QRNNVGRPA 108>NP_000625 Length = 350 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRNNVGRS 8 +RNN+GR+ Sbjct: 279 RRNNIGRA 286>NP_005092 Length = 165 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNNVGRSA 9 RNN GRS+ Sbjct: 87 RNNKGRSS 94>NP_699192 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNNVGRSA 9 RNN GR A Sbjct: 372 RNNQGRDA 379>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +NNVG+S+ Sbjct: 6706 QNNVGKSS 6713Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +N+VGRS+ Sbjct: 5581 QNDVGRSS 5588>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +NNVG+S+ Sbjct: 5779 QNNVGKSS 5786Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +N+VGRS+ Sbjct: 4654 QNDVGRSS 4661>XP_006716298 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNNVGRSA 9 RN +GRS+ Sbjct: 426 RNQIGRSS 433>XP_006716297 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNNVGRSA 9 RN +GRS+ Sbjct: 426 RNQIGRSS 433>XP_006714514 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNNVGRSA 9 RNN GR A Sbjct: 248 RNNQGRDA 255>XP_006714513 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RNNVGRSA 9 RNN GR A Sbjct: 372 RNNQGRDA 379>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +NNVG+S+ Sbjct: 6707 QNNVGKSS 6714Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +N+VGRS+ Sbjct: 5582 QNDVGRSS 5589>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +NNVG+S+ Sbjct: 6707 QNNVGKSS 6714Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +N+VGRS+ Sbjct: 5582 QNDVGRSS 5589>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +NNVG+S+ Sbjct: 7023 QNNVGKSS 7030Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 +N+VGRS+ Sbjct: 5898 QNDVGRSS 5905>NP_001177203 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QRNNVG 6 +RNNVG Sbjct: 70 ERNNVG 75>NP_005392 Length = 1187 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RNNVGRSA 9 RN +GR A Sbjct: 242 RNRIGRQA 249>NP_054889 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RNNVGRSA 9 R+NVG+S+ Sbjct: 118 RSNVGKSS 125>NP_055703 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 97 KNNVGR 102>NP_663771 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRNNVGRSA 9 +RNNVG A Sbjct: 129 RRNNVGFGA 137>NP_620160 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 94 KNNVGR 99>NP_001035109 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 97 KNNVGR 102>NP_874362 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRNNVGR 7 ++NNVGR Sbjct: 24 RQNNVGR 30Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNNVGRSA 9 RN+VGR A Sbjct: 44 RNHVGRVA 51>XP_006714215 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVGRSA 9 NVGRSA Sbjct: 1750 NVGRSA 1755>XP_006714214 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVGRSA 9 NVGRSA Sbjct: 1750 NVGRSA 1755>XP_005262915 Length = 3544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVGRSA 9 NVGRSA Sbjct: 1750 NVGRSA 1755>XP_006713030 Length = 187 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 57 KNNVGR 62>XP_006713029 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 58 KNNVGR 63>XP_005264921 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 93 KNNVGR 98>XP_005264920 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 93 KNNVGR 98>XP_006713028 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 94 KNNVGR 99>XP_005264919 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 +NNVGR Sbjct: 94 KNNVGR 99>XP_005264631 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QRNNVG 6 +RNNVG Sbjct: 70 ERNNVG 75>XP_005264630 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QRNNVG 6 +RNNVG Sbjct: 70 ERNNVG 75>XP_005264629 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QRNNVG 6 +RNNVG Sbjct: 70 ERNNVG 75>NP_055806 Length = 3526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NVGRSA 9 NVGRSA Sbjct: 1732 NVGRSA 1737>NP_001078853 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNNVGRS 8 R+NVGR+ Sbjct: 68 RSNVGRA 74>NP_665682 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 580 RNNIGK 585>NP_663160 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 502 RNNIGK 507>NP_663162 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 466 RNNIGK 471>NP_056365 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 533 RNNIGK 538>NP_899243 Length = 1977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QRNNVGR 7 Q NNVG+ Sbjct: 1357 QTNNVGK 1363>NP_663161 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 497 RNNIGK 502>NP_001188410 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 545 RNNIGK 550>NP_115912 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 576 RNNIGK 581>NP_001188411 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 540 RNNIGK 545>NP_001188409 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 601 RNNIGK 606>NP_665741 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 484 RNNIGK 489>XP_003403542 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNNVGRS 8 +N+VGRS Sbjct: 458 KNDVGRS 464>XP_006723427 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNNVGRS 8 R+NVGR+ Sbjct: 105 RSNVGRA 111>XP_005257067 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 484 RNNIGK 489>XP_006720135 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QRNNVGR 7 Q NNVG+ Sbjct: 1349 QTNNVGK 1355>XP_006720134 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QRNNVGR 7 Q NNVG+ Sbjct: 1349 QTNNVGK 1355>XP_006720133 Length = 1969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QRNNVGR 7 Q NNVG+ Sbjct: 1349 QTNNVGK 1355>XP_006715747 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 180 RNNIGK 185>XP_006715746 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 466 RNNIGK 471>XP_006715745 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 497 RNNIGK 502>XP_006715744 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 502 RNNIGK 507>XP_005249755 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 533 RNNIGK 538>XP_006713282 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRNNVGRS 8 Q+N VGR+ Sbjct: 341 QQNGVGRA 348>XP_006713281 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRNNVGRS 8 Q+N VGR+ Sbjct: 468 QQNGVGRA 475>XP_005265326 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRNNVGRS 8 Q+N VGR+ Sbjct: 508 QQNGVGRA 515>XP_005265323 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QRNNVGRS 8 Q+N VGR+ Sbjct: 535 QQNGVGRA 542>XP_006712295 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 565 RNNIGK 570>XP_006712294 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 RNNVGR 7 RNN+G+ Sbjct: 570 RNNIGK 575>XP_003403793 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RNNVGRS 8 +N+VGRS Sbjct: 458 KNDVGRS 464Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.119 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,007 Number of extensions: 1007 Number of successful extensions: 73 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |