Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1135 XP_005248577 18 1135 XP_005248576 18 1135 XP_005263378 17 2528 NP_003719 17 2528 NP_570629 17 3301 NP_001034439 17 3301 NP_001927 17 3301 NP_001277181 17 3301 NP_079358 17 3301 XP_006721341 17 3301 XP_006721340 17 3301 XP_006715935 17 3301 XP_006715934 17 3301 NP_057693 17 4312 NP_065105 17 4312 XP_005267805 17 4312 XP_005267804 17 4312 NP_703143 16 5631 NP_055747 16 7355 XP_005247294 16 7355 XP_005247293 16 7355 XP_005247292 16 7355 XP_005247291 16 7355 XP_005247290 16 7355 XP_006713603 16 7355 XP_005247289 16 7355 NP_002519 15 9605 NP_001136105 15 9605 NP_056355 15 9605 NP_055123 15 9605 NP_001171516 15 9605 NP_001171515 15 9605 NP_079533 15 9605 NP_001238784 15 9605 NP_001238780 15 9605 NP_001238781 15 9605 NP_057340 15 9605 NP_001238782 15 9605 XP_005256637 15 9605 XP_005256636 15 9605 XP_006720533 15 9605 XP_006720532 15 9605 XP_005254354 15 9605 NP_060064 15 9605>NP_005912 Length = 1512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLRIA FG Sbjct: 1382 QRLRIADFG 1390>XP_005248577 Length = 1349 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLRIA FG Sbjct: 1219 QRLRIADFG 1227>XP_005248576 Length = 1375 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLRIA FG Sbjct: 1245 QRLRIADFG 1253>XP_005263378 Length = 950 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRLRIAVFG 9 +RL++A+FG Sbjct: 699 KRLKLAIFG 707>NP_003719 Length = 931 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRLRIAVFG 9 +RL++A+FG Sbjct: 680 KRLKLAIFG 688>NP_570629 Length = 865 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 703 RTRVAVFG 710>NP_001034439 Length = 801 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 639 RTRVAVFG 646>NP_001927 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 641 RTRVAVFG 648>NP_001277181 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 596 RTRVAVFG 603>NP_079358 Length = 561 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QRLRIAVF 8 QRLR++VF Sbjct: 155 QRLRLSVF 162>XP_006721341 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QRLRIAVF 8 QRLR++VF Sbjct: 52 QRLRLSVF 59>XP_006721340 Length = 458 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QRLRIAVF 8 QRLR++VF Sbjct: 52 QRLRLSVF 59>XP_006715935 Length = 804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 642 RTRVAVFG 649>XP_006715934 Length = 804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLRIAVFG 9 R R+AVFG Sbjct: 642 RTRVAVFG 649>NP_057693 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLR+A+ G Sbjct: 184 QRLRVALAG 192>NP_065105 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLR+A+ G Sbjct: 184 QRLRVALAG 192>XP_005267805 Length = 412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLR+A+ G Sbjct: 184 QRLRVALAG 192>XP_005267804 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRLRIAVFG 9 QRLR+A+ G Sbjct: 184 QRLRVALAG 192>NP_703143 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QRLRIAVF 8 +RLR AVF Sbjct: 165 ERLRFAVF 172>NP_055747 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 253 LRITVFG 259>XP_005247294 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 101 LRITVFG 107>XP_005247293 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 253 LRITVFG 259>XP_005247292 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 253 LRITVFG 259>XP_005247291 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 253 LRITVFG 259>XP_005247290 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 273 LRITVFG 279>XP_006713603 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 273 LRITVFG 279>XP_005247289 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LRI VFG Sbjct: 273 LRITVFG 279>NP_002519 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRLRIAVFG 9 QRLR+A G Sbjct: 62 QRLRVAYEG 70>NP_001136105 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 517 LRVVVFG 523>NP_056355 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LRIAVFG 9 LR+A+FG Sbjct: 1244 LRLALFG 1250>NP_055123 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 517 LRVVVFG 523>NP_001171516 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRLRIAV 7 QR+RIA+ Sbjct: 256 QRIRIAI 262>NP_001171515 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRLRIAV 7 QR+RIA+ Sbjct: 290 QRIRIAI 296>NP_079533 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRLRIAV 7 QR+RIA+ Sbjct: 332 QRIRIAI 338>NP_001238784 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 131 LRVVVFG 137>NP_001238780 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 131 LRVVVFG 137>NP_001238781 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 131 LRVVVFG 137>NP_057340 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LRIAVFG 9 LR+A+FG Sbjct: 11 LRLALFG 17>NP_001238782 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 131 LRVVVFG 137>XP_005256637 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 517 LRVVVFG 523>XP_005256636 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LRIAVFG 9 LR+ VFG Sbjct: 517 LRVVVFG 523>XP_006720533 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LRIAVFG 9 LR+A+FG Sbjct: 949 LRLALFG 955>XP_006720532 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LRIAVFG 9 LR+A+FG Sbjct: 1184 LRLALFG 1190>XP_005254354 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LRIAVFG 9 LR+A+FG Sbjct: 1244 LRLALFG 1250>NP_060064 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RIAVFG 9 R+AVFG Sbjct: 9 RVAVFG 14Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.158 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 348,715 Number of extensions: 476 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |