Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1935 NP_001035957 18 1935 XP_006721991 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_055921 17 3301 XP_006713125 17 3301 XP_006713124 17 3301 NP_057308 16 5631 NP_001034230 16 5631 NP_653184 16 5631 NP_001034451 16 5631 XP_005267072 16 5631 NP_060236 16 7355 NP_001073312 16 7355 NP_005157 16 7355 NP_001019978 16 7355 XP_005259656 16 7355 XP_006710775 16 7355 XP_005263536 16 7355 NP_277052 15 9605 NP_733936 15 9605 NP_001071 15 9605 NP_056099 15 9605 NP_001272369 15 9605 NP_689969 15 9605 NP_001272368 15 9605 NP_060481 15 9605 NP_055951 15 9605 NP_001172003 15 9605 NP_001171988 15 9605 NP_078893 15 9605 NP_848613 15 9605 NP_001264262 15 9605 NP_001325 15 9605 XP_003959998 15 9605 XP_005256671 15 9605 XP_005252265 15 9605 XP_005252264 15 9605 XP_006717348 15 9605 XP_006717347 15 9605 XP_006717346 15 9605 XP_005248335 15 9605 XP_006714526 15 9605 XP_005265032 15 9605 XP_005265031 15 9605 XP_005265030 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605 NP_776246 15 9605>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1235 QWDELARVL 1243>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1235 QWDELARVL 1243>XP_006721991 Length = 1632 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1235 QWDELARVL 1243>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1232 QWDELARVL 1240>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1235 QWDELARVL 1243>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 Q DELARVL Sbjct: 1245 QWDELARVL 1253>NP_055921 Length = 1467 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QRDELARVL 9 QRD L RVL Sbjct: 241 QRDALGRVL 249>XP_006713125 Length = 1467 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QRDELARVL 9 QRD L RVL Sbjct: 241 QRDALGRVL 249>XP_006713124 Length = 1467 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QRDELARVL 9 QRD L RVL Sbjct: 241 QRDALGRVL 249>NP_057308 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 +RDELA V+ Sbjct: 370 ERDELAGVM 378>NP_001034230 Length = 2365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD+LAR L Sbjct: 1602 RDDLARAL 1609>NP_653184 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRDELARVL 9 +R+E+AR+L Sbjct: 260 EREEMARLL 268>NP_001034451 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRDELARVL 9 +R+E+AR+L Sbjct: 260 EREEMARLL 268>XP_005267072 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 +RDELA V+ Sbjct: 363 ERDELAGVM 371>NP_060236 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RDELAR 7 RDELAR Sbjct: 197 RDELAR 202>NP_001073312 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RDELAR 7 RDELAR Sbjct: 197 RDELAR 202>NP_005157 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QRDELA 6 QRDELA Sbjct: 566 QRDELA 571>NP_001019978 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QRDELA 6 QRDELA Sbjct: 567 QRDELA 572>XP_005259656 Length = 1373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QRDELA 6 QRDELA Sbjct: 1286 QRDELA 1291>XP_006710775 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RDELAR 7 RDELAR Sbjct: 197 RDELAR 202>XP_005263536 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RDELAR 7 RDELAR Sbjct: 221 RDELAR 226>NP_277052 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 R+ELAR+ Sbjct: 1298 REELARI 1304>NP_733936 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDELARVL 9 +D+LAR++ Sbjct: 135 KDDLARII 142>NP_001071 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RDELARVL 9 +D+LAR++ Sbjct: 135 KDDLARII 142>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 2118 DELVRVL 2124>NP_001272369 Length = 1385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD LARV+ Sbjct: 424 RDGLARVI 431>NP_689969 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD LARV+ Sbjct: 709 RDGLARVI 716>NP_001272368 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD LARV+ Sbjct: 709 RDGLARVI 716>NP_060481 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QRDELARVL 9 +R+EL R+L Sbjct: 197 KREELERIL 205>NP_055951 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 +DELAR+ Sbjct: 1629 QDELARI 1635>NP_001172003 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 845 EELARVL 851>NP_001171988 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>NP_078893 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>NP_848613 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 439 DELGRVL 445>NP_001264262 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 RDE+AR+ Sbjct: 565 RDEIARL 571>NP_001325 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QRDELARVL 9 Q DE+A+ L Sbjct: 227 QEDEMAKAL 235>XP_003959998 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 RDE+AR+ Sbjct: 287 RDEIARL 293>XP_005256671 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 439 DELGRVL 445>XP_005252265 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>XP_005252264 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>XP_006717348 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>XP_006717347 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>XP_006717346 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DELARVL 9 +ELARVL Sbjct: 1081 EELARVL 1087>XP_005248335 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD LARV+ Sbjct: 424 RDGLARVI 431>XP_006714526 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 RD LARV+ Sbjct: 709 RDGLARVI 716>XP_005265032 Length = 2545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 +DELAR+ Sbjct: 1629 QDELARI 1635>XP_005265031 Length = 2569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 +DELAR+ Sbjct: 1629 QDELARI 1635>XP_005265030 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RDELARV 8 +DELAR+ Sbjct: 1629 QDELARI 1635>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 1883 DELVRVL 1889>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 2175 DELVRVL 2181>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DELARVL 9 DEL RVL Sbjct: 2196 DELVRVL 2202>NP_776246 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RDELARVL 9 R ELARVL Sbjct: 92 RCELARVL 99Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.140 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,058 Number of extensions: 702 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |