Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_000485 18 1135 NP_003473 18 1935 XP_006719679 18 1935 XP_005269219 18 1935 XP_006719678 18 1935 XP_006719677 18 1935 NP_001033722 16 5631 NP_001229838 16 5631 NP_001229839 16 5631 NP_001229837 16 5631 NP_001269582 16 5631 NP_001269581 16 5631 NP_006810 16 5631 NP_001230925 16 5631 NP_001263309 16 5631 NP_057733 16 5631 NP_001027 16 5631 XP_006710646 16 5631 NP_000042 16 7355 NP_001159751 16 7355 NP_055686 16 7355 NP_001120932 16 7355 NP_000287 16 7355 NP_001009944 16 7355 NP_001167574 16 7355 NP_001107859 16 7355 NP_001018082 16 7355 NP_001017523 16 7355 NP_872412 16 7355 XP_005276550 16 7355 XP_005255427 16 7355 XP_006720956 16 7355 XP_006720955 16 7355 XP_006720954 16 7355 XP_006720953 16 7355 XP_006720952 16 7355 XP_005268702 16 7355 XP_006718908 16 7355 XP_005271621 16 7355 XP_006718907 16 7355 XP_006718906 16 7355 XP_005271619 16 7355 XP_005271618 16 7355 XP_006714269 16 7355 NP_001804 15 9605 NP_001171588 15 9605 NP_004888 15 9605 NP_001273663 15 9605 NP_004392 15 9605 NP_998731 15 9605 XP_006718141 15 9605 NP_786924 15 9605 NP_689497 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4528 QRDEVRQIA 4536>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4544 QRDEVRQIA 4552>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4545 QRDEVRQIA 4553>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4576 QRDEVRQIA 4584>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4600 QRDEVRQIA 4608>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4599 QRDEVRQIA 4607>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4599 QRDEVRQIA 4607>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4599 QRDEVRQIA 4607>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 QRD+VRQIA Sbjct: 4600 QRDEVRQIA 4608>NP_000485 Length = 1497 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QRDDVRQ 7 QRDDVRQ Sbjct: 1092 QRDDVRQ 1098>NP_003473 Length = 5537 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 +RD+V+QIA Sbjct: 5158 ERDEVKQIA 5166>XP_006719679 Length = 5536 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 +RD+V+QIA Sbjct: 5157 ERDEVKQIA 5165>XP_005269219 Length = 5537 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 +RD+V+QIA Sbjct: 5158 ERDEVKQIA 5166>XP_006719678 Length = 5539 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 +RD+V+QIA Sbjct: 5160 ERDEVKQIA 5168>XP_006719677 Length = 5540 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QRDDVRQIA 9 +RD+V+QIA Sbjct: 5161 ERDEVKQIA 5169>NP_001033722 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRDDVRQI 8 +R+D+RQ+ Sbjct: 65 ERNDIRQV 72>NP_001229838 Length = 236 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRDDVRQI 8 +R+D+RQ+ Sbjct: 38 ERNDIRQV 45>NP_001229839 Length = 200 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRDDVRQI 8 +R+D+RQ+ Sbjct: 65 ERNDIRQV 72>NP_001229837 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRDDVRQI 8 +R+D+RQ+ Sbjct: 65 ERNDIRQV 72>NP_001269582 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R+D RQIA Sbjct: 269 REDYRQIA 276>NP_001269581 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R+D RQIA Sbjct: 340 REDYRQIA 347>NP_006810 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R+D RQIA Sbjct: 293 REDYRQIA 300>NP_001230925 Length = 4865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DDVRQI Sbjct: 1741 DDVRQI 1746>NP_001263309 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRDDVRQIA 9 Q+DD QIA Sbjct: 572 QKDDEEQIA 580>NP_057733 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QRDDVRQIA 9 Q+DD QIA Sbjct: 572 QKDDEEQIA 580>NP_001027 Length = 4870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DDVRQI Sbjct: 1741 DDVRQI 1746>XP_006710646 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QRDDVRQI 8 +R+D+RQ+ Sbjct: 65 ERNDIRQV 72>NP_000042 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2719 RDDLRQDA 2726>NP_001159751 Length = 1201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 117 DDIRQI 122>NP_055686 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 117 DDIRQI 122>NP_001120932 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 117 DDIRQI 122>NP_000287 Length = 4302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2659 DDIQQIA 2665>NP_001009944 Length = 4303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2659 DDIQQIA 2665>NP_001167574 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QRDDVRQ 7 QRD VRQ Sbjct: 145 QRDTVRQ 151>NP_001107859 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 286 DDIRQI 291>NP_001018082 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DDVRQIA 9 DDVRQ A Sbjct: 527 DDVRQAA 533>NP_001017523 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DDVRQIA 9 DDVRQ A Sbjct: 64 DDVRQAA 70>NP_872412 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 289 DDIRQI 294>XP_005276550 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 164 DDIQQIA 170>XP_005255427 Length = 3288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 1644 DDIQQIA 1650>XP_006720956 Length = 3895 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2251 DDIQQIA 2257>XP_006720955 Length = 4279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2635 DDIQQIA 2641>XP_006720954 Length = 4334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2696 DDIQQIA 2702>XP_006720953 Length = 4339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2696 DDIQQIA 2702>XP_006720952 Length = 4340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++QIA Sbjct: 2696 DDIQQIA 2702>XP_005268702 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DDVRQIA 9 DDVRQ A Sbjct: 150 DDVRQAA 156>XP_006718908 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 1371 RDDLRQDA 1378>XP_005271621 Length = 2708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2371 RDDLRQDA 2378>XP_006718907 Length = 3050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2713 RDDLRQDA 2720>XP_006718906 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2719 RDDLRQDA 2726>XP_005271619 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2719 RDDLRQDA 2726>XP_005271618 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 RDD+RQ A Sbjct: 2719 RDDLRQDA 2726>XP_006714269 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DDVRQI 8 DD+RQI Sbjct: 255 DDIRQI 260>NP_001804 Length = 2701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QRDDVRQI 8 +RDD+R + Sbjct: 1687 ERDDLRSV 1694>NP_001171588 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R D+RQ+A Sbjct: 151 RQDMRQLA 158>NP_004888 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R D+RQ+A Sbjct: 151 RQDMRQLA 158>NP_001273663 Length = 2580 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QRDDVRQI 8 +RDD+R + Sbjct: 1662 ERDDLRSV 1669>NP_004392 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRDDVRQ 7 QR++VRQ Sbjct: 181 QREEVRQ 187>NP_998731 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QRDDVRQ 7 QR++VRQ Sbjct: 181 QREEVRQ 187>XP_006718141 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RDDVRQIA 9 R D+RQ+A Sbjct: 151 RQDMRQLA 158>NP_786924 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RDDVRQI 8 +DDVR++ Sbjct: 245 KDDVREV 251>NP_689497 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DDVRQIA 9 DD++Q+A Sbjct: 223 DDIKQLA 229Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.137 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 502,640 Number of extensions: 820 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |