Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004201 16 7355 XP_005270327 16 7355 XP_005270326 16 7355 NP_689846 15 9605 NP_001018123 15 9605 NP_001159921 15 9605 NP_001258152 15 9605 NP_055571 15 9605 NP_001008938 15 9605 NP_002209 15 9605 NP_001092093 15 9605 NP_005615 15 9605 NP_001188288 15 9605 XP_006711891 15 9605 XP_006711888 15 9605 XP_006711887 15 9605 XP_005273364 15 9605 XP_005273362 15 9605 XP_005273361 15 9605 XP_006711886 15 9605 XP_006711885 15 9605 XP_005273359 15 9605 XP_006711884 15 9605 XP_005273357 15 9605 XP_005273356 15 9605 XP_005273358 15 9605 XP_005273355 15 9605 XP_005273353 15 9605 XP_005273352 15 9605 XP_005273354 15 9605 XP_005273349 15 9605 XP_006711883 15 9605 XP_005273350 15 9605 XP_005273351 15 9605 XP_006711882 15 9605 XP_005273348 15 9605 XP_005273346 15 9605 XP_005273347 15 9605 XP_005273345 15 9605 XP_005273344 15 9605>NP_004201 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAVQLVDS 9 R VQL+DS Sbjct: 211 RGVQLLDS 218>XP_005270327 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAVQLVDS 9 R VQL+DS Sbjct: 136 RGVQLLDS 143>XP_005270326 Length = 557 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RAVQLVDS 9 R VQL+DS Sbjct: 194 RGVQLLDS 201>NP_689846 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 AVQL+DS Sbjct: 286 AVQLMDS 292>NP_001018123 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 AVQL+DS Sbjct: 286 AVQLMDS 292>NP_001159921 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 AVQL+DS Sbjct: 359 AVQLLDS 365>NP_001258152 Length = 8923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7351 SVQLVDS 7357>NP_055571 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRAVQLVD 8 Q+AV+L+D Sbjct: 624 QKAVELMD 631>NP_001008938 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QRAVQLVD 8 Q+AV+L+D Sbjct: 624 QKAVELMD 631>NP_002209 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 AVQL+DS Sbjct: 359 AVQLLDS 365>NP_001092093 Length = 7968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 6394 SVQLVDS 6400>NP_005615 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRAVQLVDS 9 QRA++L+D+ Sbjct: 84 QRAMKLLDA 92>NP_001188288 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QRAVQLVDS 9 QRA++L+D+ Sbjct: 84 QRAMKLLDA 92>XP_006711891 Length = 8925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7351 SVQLVDS 7357>XP_006711888 Length = 8059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 6485 SVQLVDS 6491>XP_006711887 Length = 8499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 6925 SVQLVDS 6931>XP_005273364 Length = 8653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7079 SVQLVDS 7085>XP_005273362 Length = 8675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7101 SVQLVDS 7107>XP_005273361 Length = 8763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7189 SVQLVDS 7195>XP_006711886 Length = 8833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7259 SVQLVDS 7265>XP_006711885 Length = 8835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7261 SVQLVDS 7267>XP_005273359 Length = 8843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7269 SVQLVDS 7275>XP_006711884 Length = 8847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7273 SVQLVDS 7279>XP_005273357 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273356 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273358 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7277 SVQLVDS 7283>XP_005273355 Length = 8924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7350 SVQLVDS 7356>XP_005273353 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273352 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273354 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7361 SVQLVDS 7367>XP_005273349 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_006711883 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_005273350 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_005273351 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7365 SVQLVDS 7371>XP_006711882 Length = 8977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7403 SVQLVDS 7409>XP_005273348 Length = 9015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7441 SVQLVDS 7447>XP_005273346 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273347 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273345 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7452 SVQLVDS 7458>XP_005273344 Length = 9027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVQLVDS 9 +VQLVDS Sbjct: 7453 SVQLVDS 7459Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.125 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 268,001 Number of extensions: 255 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |