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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_444256                                                              17    2528
NP_444254                                                              17    2528
NP_444253                                                              17    2528
NP_444255                                                              17    2528
XP_005247551                                                           17    2528
XP_005247550                                                           17    2528
XP_006713712                                                           17    2528
XP_005247549                                                           17    2528
NP_001265454                                                           16    7355
NP_001265453                                                           16    7355
NP_055618                                                              16    7355
NP_000005                                                              16    7355
XP_006719119                                                           16    7355
NP_001106905                                                           15    9605
XP_005256678                                                           15    9605
XP_006721577                                                           15    9605

>NP_444256
          Length = 1794

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 202 QPSARVSVS 210



>NP_444254
          Length = 1845

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 202 QPSARVSVS 210



>NP_444253
          Length = 1914

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 202 QPSARVSVS 210



>NP_444255
          Length = 1863

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 202 QPSARVSVS 210



>XP_005247551
          Length = 1855

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 212 QPSARVSVS 220



>XP_005247550
          Length = 1856

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 212 QPSARVSVS 220



>XP_006713712
          Length = 1923

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 212 QPSARVSVS 220



>XP_005247549
          Length = 1924

 Score = 17.3 bits (33), Expect =  2528
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           Q SARVSVS
Sbjct: 212 QPSARVSVS 220



>NP_001265454
          Length = 1483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  QQSARVSVS 9
          QQ+AR S+S
Sbjct: 78 QQTARKSIS 86



>NP_001265453
          Length = 1483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  QQSARVSVS 9
          QQ+AR S+S
Sbjct: 78 QQTARKSIS 86



>NP_055618
          Length = 1483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  QQSARVSVS 9
          QQ+AR S+S
Sbjct: 78 QQTARKSIS 86



>NP_000005
          Length = 1474

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           ++SAR SVS
Sbjct: 941 EESARASVS 949



>XP_006719119
          Length = 1512

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   QQSARVSVS 9
           ++SAR SVS
Sbjct: 941 EESARASVS 949



>NP_001106905
          Length = 221

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QQSARVSV 8
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



>XP_005256678
          Length = 203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QQSARVSV 8
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



>XP_006721577
          Length = 203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   QQSARVSV 8
           +QS+R+SV
Sbjct: 113 EQSSRISV 120



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.297   0.0990    0.206 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 172,149
Number of extensions: 123
Number of successful extensions: 16
Number of sequences better than 10000.0: 16
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 16
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)