Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 21 229 XP_005271924 21 229 XP_005271923 21 229 NP_112211 17 2528 XP_005267209 17 2528 NP_002462 16 5631 NP_000248 16 5631 NP_001036037 16 5631 NP_001262 16 5631 XP_005267753 16 5631 XP_006720215 16 5631 XP_006720214 16 5631 XP_005267751 16 5631 NP_001191676 16 7355 NP_002904 16 7355 NP_115956 16 7355 NP_001264198 16 7355 NP_036553 16 7355 NP_001264262 16 7355 XP_003959998 16 7355 NP_001005514 16 7355 NP_619634 16 7355 NP_821079 15 9605 NP_001120670 15 9605 NP_009198 15 9605 NP_055573 15 9605 NP_689491 15 9605 NP_065816 15 9605 NP_001239004 15 9605 NP_001239002 15 9605 NP_004776 15 9605 NP_001123484 15 9605 NP_001239005 15 9605 XP_005257055 15 9605 XP_005257054 15 9605 XP_005257053 15 9605 XP_005257052 15 9605 XP_005255760 15 9605 XP_006721044 15 9605 XP_005255759 15 9605 XP_005271603 15 9605 XP_005271602 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_001005482 15 9605 NP_001004759 15 9605>NP_001261 Length = 1710 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNVRGMRKL 9 QNVRGM+KL Sbjct: 341 QNVRGMKKL 349>XP_005271924 Length = 1710 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNVRGMRKL 9 QNVRGM+KL Sbjct: 341 QNVRGMKKL 349>XP_005271923 Length = 1798 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNVRGMRKL 9 QNVRGM+KL Sbjct: 341 QNVRGMKKL 349>NP_112211 Length = 165 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRGMRKL 9 +RGMRKL Sbjct: 151 IRGMRKL 157>XP_005267209 Length = 108 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VRGMRKL 9 +RGMRKL Sbjct: 94 IRGMRKL 100>NP_002462 Length = 1939 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1837 ESVKGMRK 1844>NP_000248 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1835 ESVKGMRK 1842>NP_001036037 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 Q V+G++KL Sbjct: 330 QKVKGLKKL 338>NP_001262 Length = 1828 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 Q V+G++KL Sbjct: 330 QKVKGLKKL 338>XP_005267753 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1835 ESVKGMRK 1842>XP_006720215 Length = 1968 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1866 ESVKGMRK 1873>XP_006720214 Length = 1978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1876 ESVKGMRK 1883>XP_005267751 Length = 1979 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 1877 ESVKGMRK 1884>NP_001191676 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +NV+G RK+ Sbjct: 509 KNVQGKRKI 517>NP_002904 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +NV+G RK+ Sbjct: 509 KNVQGKRKI 517>NP_115956 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +N+RG+ K+ Sbjct: 111 ENIRGLDKI 119Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +N+RG+ K+ Sbjct: 159 ENIRGLDKI 167>NP_001264198 Length = 2925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QNVRGMR 7 +NV+GMR Sbjct: 47 RNVKGMR 53>NP_036553 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QNVRGMRK 8 +N RGM+K Sbjct: 966 KNARGMQK 973>NP_001264262 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 QN++G +KL Sbjct: 473 QNLQGKKKL 481>XP_003959998 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 QN++G +KL Sbjct: 195 QNLQGKKKL 203>NP_001005514 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++V+GMRK Sbjct: 229 KSVKGMRK 236>NP_619634 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRGMRKL 9 +RGM+KL Sbjct: 135 IRGMQKL 141>NP_821079 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 + RG+RKL Sbjct: 151 EQFRGLRKL 159>NP_001120670 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 741 QVVRGQRKV 749>NP_009198 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 741 QVVRGQRKV 749>NP_055573 Length = 992 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +NV+G +KL Sbjct: 604 KNVKGPKKL 612>NP_689491 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QNVRGMRK 8 + +RG+RK Sbjct: 74 EEIRGLRK 81>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3236 HVRGIKKL 3243>NP_001239004 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 89 QNVEGLR 95>NP_001239002 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 91 QNVEGLR 97>NP_004776 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 202 QNVEGLR 208>NP_001123484 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 202 QNVEGLR 208>NP_001239005 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 91 QNVEGLR 97>XP_005257055 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 514 QVVRGQRKV 522>XP_005257054 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 681 QVVRGQRKV 689>XP_005257053 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 741 QVVRGQRKV 749>XP_005257052 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNVRGMRKL 9 Q VRG RK+ Sbjct: 741 QVVRGQRKV 749>XP_005255760 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 67 QNVEGLR 73>XP_006721044 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 67 QNVEGLR 73>XP_005255759 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QNVRGMR 7 QNV G+R Sbjct: 250 QNVEGLR 256>XP_005271603 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +NV+G +KL Sbjct: 604 KNVKGPKKL 612>XP_005271602 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNVRGMRKL 9 +NV+G +KL Sbjct: 604 KNVKGPKKL 612>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3230 HVRGIKKL 3237>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3241 HVRGIKKL 3248>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3247 HVRGIKKL 3254>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3248 HVRGIKKL 3255>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3265 HVRGIKKL 3272>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3274 HVRGIKKL 3281>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3275 HVRGIKKL 3282>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3275 HVRGIKKL 3282>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NVRGMRKL 9 +VRG++KL Sbjct: 3276 HVRGIKKL 3283>NP_001005482 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QNVRGMRK 8 ++VRG+RK Sbjct: 234 KSVRGVRK 241>NP_001004759 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NVRGMR 7 NVRG+R Sbjct: 345 NVRGLR 350Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.138 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,685 Number of extensions: 616 Number of successful extensions: 54 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |