Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 19 665 NP_858045 19 665 NP_006525 19 665 NP_001167559 19 665 NP_000236 18 1482 NP_001120972 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_001035545 17 4312 NP_071427 16 7355 NP_060082 16 7355 NP_001025226 16 7355 NP_001164 16 7355 XP_005262233 16 7355 XP_005262232 16 7355 XP_005267693 16 7355 XP_005267692 16 7355 XP_006719555 16 7355 XP_005253638 16 7355 XP_006719554 16 7355 NP_056261 15 9605 NP_036440 15 9605 NP_115979 15 9605 NP_001127958 15 9605 NP_443174 15 9605 NP_006142 15 9605 NP_001005366 15 9605 NP_001153574 15 9605 NP_001243334 15 9605 NP_940931 15 9605 NP_001138525 15 9605 XP_005258606 15 9605 XP_006723100 15 9605 XP_006721944 15 9605 XP_006721943 15 9605 XP_006721942 15 9605 XP_005254018 15 9605 XP_005254013 15 9605 XP_005254012 15 9605 XP_005254011 15 9605 XP_006718544 15 9605 XP_006718543 15 9605 XP_006718542 15 9605 XP_006711822 15 9605 XP_006711821 15 9605 NP_653289 15 9605>NP_001167558 Length = 1423 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QNRSLLRNS 9 QNR LLRNS Sbjct: 1025 QNRPLLRNS 1033>NP_858045 Length = 1424 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QNRSLLRNS 9 QNR LLRNS Sbjct: 1025 QNRPLLRNS 1033>NP_006525 Length = 1420 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QNRSLLRNS 9 QNR LLRNS Sbjct: 1025 QNRPLLRNS 1033>NP_001167559 Length = 1415 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QNRSLLRNS 9 QNR LLRNS Sbjct: 1020 QNRPLLRNS 1028>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 NRSLLRNS 9 NR+LLRNS Sbjct: 399 NRTLLRNS 406>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 NRSLLRNS 9 NR+LLRNS Sbjct: 399 NRTLLRNS 406>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 NRSLLRNS 9 NR+LLRNS Sbjct: 418 NRTLLRNS 425>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 NRSLLRNS 9 NR+LLRNS Sbjct: 418 NRTLLRNS 425>NP_001035545 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NRSLLRN 8 NR+LLRN Sbjct: 528 NRALLRN 534>NP_071427 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 +NR L+NS Sbjct: 164 ENRDFLKNS 172>NP_060082 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLLRNS 9 RSLL+NS Sbjct: 689 RSLLKNS 695>NP_001025226 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 QNR +RNS Sbjct: 1116 QNRIKIRNS 1124>NP_001164 Length = 1501 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 QNR +RNS Sbjct: 1116 QNRIKIRNS 1124>XP_005262233 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 +NR L+NS Sbjct: 164 ENRDFLKNS 172>XP_005262232 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 +NR L+NS Sbjct: 101 ENRDFLKNS 109>XP_005267693 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 QNR +RNS Sbjct: 1116 QNRIKIRNS 1124>XP_005267692 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 QNR +RNS Sbjct: 1116 QNRIKIRNS 1124>XP_006719555 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLLRNS 9 RSLL+NS Sbjct: 451 RSLLKNS 457>XP_005253638 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLLRNS 9 RSLL+NS Sbjct: 451 RSLLKNS 457>XP_006719554 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLLRNS 9 RSLL+NS Sbjct: 612 RSLLKNS 618>NP_056261 Length = 2275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 + RSL RNS Sbjct: 996 RERSLARNS 1004>NP_036440 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1034 NRSKLRN 1040>NP_115979 Length = 1336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1208 NRSKLRN 1214>NP_001127958 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 562 QNRSLL 567>NP_443174 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 562 QNRSLL 567>NP_006142 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 211 QNRSLL 216>NP_001005366 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1139 NRSKLRN 1145>NP_001153574 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 128 QNRSLL 133>NP_001243334 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 595 NRSKLRN 601>NP_940931 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLLRN 8 RSLLRN Sbjct: 425 RSLLRN 430>NP_001138525 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLLRN 8 RSLLRN Sbjct: 369 RSLLRN 374>XP_005258606 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 238 QNRSLL 243>XP_006723100 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 238 QNRSLL 243>XP_006721944 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLLRN 8 RSLLRN Sbjct: 425 RSLLRN 430>XP_006721943 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLLRN 8 RSLLRN Sbjct: 425 RSLLRN 430>XP_006721942 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RSLLRN 8 RSLLRN Sbjct: 425 RSLLRN 430>XP_005254018 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 648 NRSKLRN 654>XP_005254013 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1171 NRSKLRN 1177>XP_005254012 Length = 1305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1177 NRSKLRN 1183>XP_005254011 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1208 NRSKLRN 1214>XP_006718544 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 928 NRSKLRN 934>XP_006718543 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 939 NRSKLRN 945>XP_006718542 Length = 1145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NRSLLRN 8 NRS LRN Sbjct: 1017 NRSKLRN 1023>XP_006711822 Length = 2266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 + RSL RNS Sbjct: 987 RERSLARNS 995>XP_006711821 Length = 2301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNRSLLRNS 9 + RSL RNS Sbjct: 1022 RERSLARNS 1030>NP_653289 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QNRSLL 6 QNRSLL Sbjct: 238 QNRSLL 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.120 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,502 Number of extensions: 710 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |