Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 390 NP_671714 20 390 XP_006715890 20 390 XP_005250160 20 390 XP_005250159 20 390 NP_001193874 17 4312 NP_001193871 17 4312 NP_006565 17 4312 NP_001193872 17 4312 XP_005271963 17 4312 XP_006714622 17 4312 XP_005271962 17 4312 XP_006714621 17 4312 NP_689761 17 4312 NP_001257449 16 5631 NP_055807 16 5631 NP_001252541 16 5631 NP_057368 16 5631 NP_996882 16 5631 XP_005267488 16 5631 XP_005267487 16 5631 NP_055803 16 7355 NP_001276053 16 7355 NP_001276051 16 7355 NP_001106191 16 7355 NP_001106190 16 7355 NP_001106189 16 7355 NP_001106188 16 7355 NP_065166 16 7355 XP_006723895 16 7355 XP_006714061 16 7355 XP_005248132 16 7355 XP_005248131 16 7355 XP_005248130 16 7355 XP_005248129 16 7355 XP_006714060 16 7355 XP_005248128 16 7355 XP_005248127 16 7355 XP_005248126 16 7355 XP_005248125 16 7355 XP_005248124 16 7355 XP_005248123 16 7355 XP_005248122 16 7355 XP_005248121 16 7355 XP_005248120 16 7355 XP_006714059 16 7355 XP_005248119 16 7355 XP_005248118 16 7355 XP_005248117 16 7355 XP_005248116 16 7355 XP_005248115 16 7355 XP_005248114 16 7355 NP_001077368 15 9605>NP_005742 Length = 3907 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 QN+MSQKIE Sbjct: 671 QNEMSQKIE 679>NP_671714 Length = 3899 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 QN+MSQKIE Sbjct: 671 QNEMSQKIE 679>XP_006715890 Length = 3860 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 QN+MSQKIE Sbjct: 671 QNEMSQKIE 679>XP_005250160 Length = 3939 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 QN+MSQKIE Sbjct: 671 QNEMSQKIE 679>XP_005250159 Length = 3952 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 QN+MSQKIE Sbjct: 671 QNEMSQKIE 679>NP_001193874 Length = 428 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNKMSQKIE 9 QN MS K+E Sbjct: 401 QNSMSPKLE 409>NP_001193871 Length = 401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNKMSQKIE 9 QN MS K+E Sbjct: 374 QNSMSPKLE 382>NP_006565 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNKMSQKIE 9 QN MS K+E Sbjct: 512 QNSMSPKLE 520>NP_001193872 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QNKMSQKIE 9 QN MS K+E Sbjct: 539 QNSMSPKLE 547>XP_005271963 Length = 248 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 +NK+S+K+E Sbjct: 177 ENKLSKKME 185>XP_006714622 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 +NK+S+K+E Sbjct: 195 ENKLSKKME 203>XP_005271962 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 +NK+S+K+E Sbjct: 195 ENKLSKKME 203>XP_006714621 Length = 368 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 +NK+S+K+E Sbjct: 297 ENKLSKKME 305>NP_689761 Length = 452 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QNKMSQKIE 9 +NK+S+K+E Sbjct: 381 ENKLSKKME 389>NP_001257449 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NKM +K+E Sbjct: 488 NKMKEKLE 495>NP_055807 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NKM +K+E Sbjct: 488 NKMKEKLE 495>NP_001252541 Length = 2371 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 Q+ M+QK+E Sbjct: 1103 QSNMTQKVE 1111>NP_057368 Length = 2376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 Q+ M+QK+E Sbjct: 1108 QSNMTQKVE 1116>NP_996882 Length = 1551 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 Q+ M+QK+E Sbjct: 1108 QSNMTQKVE 1116>XP_005267488 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NKM +K+E Sbjct: 488 NKMKEKLE 495>XP_005267487 Length = 1078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NKM +K+E Sbjct: 488 NKMKEKLE 495>NP_055803 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>NP_001276053 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 527 ENEMSGKVE 535>NP_001276051 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 686 ENEMSGKVE 694>NP_001106191 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 532 ENEMSGKVE 540>NP_001106190 Length = 902 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 544 ENEMSGKVE 552>NP_001106189 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>NP_001106188 Length = 1057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>NP_065166 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NK+ QK+E Sbjct: 360 NKVRQKVE 367>XP_006723895 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NKMSQKIE 9 NK+ QK+E Sbjct: 360 NKVRQKVE 367>XP_006714061 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 686 ENEMSGKVE 694>XP_005248132 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 686 ENEMSGKVE 694>XP_005248131 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 686 ENEMSGKVE 694>XP_005248130 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 686 ENEMSGKVE 694>XP_005248129 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>XP_006714060 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>XP_005248128 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 698 ENEMSGKVE 706>XP_005248127 Length = 1322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248126 Length = 1359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 971 ENEMSGKVE 979>XP_005248125 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1051 ENEMSGKVE 1059>XP_005248124 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1083 ENEMSGKVE 1091>XP_005248123 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1083 ENEMSGKVE 1091>XP_005248122 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1083 ENEMSGKVE 1091>XP_005248121 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1155 ENEMSGKVE 1163>XP_005248120 Length = 1549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1161 ENEMSGKVE 1169>XP_006714059 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248119 Length = 1601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248118 Length = 1602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248117 Length = 1626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248116 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248115 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>XP_005248114 Length = 1630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QNKMSQKIE 9 +N+MS K+E Sbjct: 1242 ENEMSGKVE 1250>NP_001077368 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QNKMSQKI 8 QNK +QK+ Sbjct: 552 QNKKTQKL 559Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.108 0.244 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 388,178 Number of extensions: 728 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |