Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 390 NP_071754 20 390 NP_001185763 20 390 NP_001002810 20 390 NP_055459 20 390 NP_001182189 20 390 NP_001002812 20 390 NP_001182190 20 390 XP_006726410 20 390 XP_006711719 20 390 XP_006711717 20 390 XP_006711716 20 390 XP_006711715 20 390 XP_006711714 20 390 XP_006711713 20 390 XP_006711710 20 390 XP_006711709 20 390 XP_006711164 20 390 NP_060208 17 4312 XP_006716856 17 4312 XP_005251549 17 4312 XP_006712027 17 4312 XP_005264245 17 4312 NP_689883 17 4312 NP_006436 16 5631 NP_001193723 16 5631 NP_057458 16 5631 XP_005273217 16 5631 NP_001126 16 7355 NP_037359 16 7355 NP_789744 16 7355 NP_055055 16 7355 NP_036459 16 7355 NP_115997 16 7355 NP_775922 16 7355 NP_258260 16 7355 XP_006724403 16 7355 XP_005261845 16 7355 XP_005261844 16 7355 XP_005261843 16 7355 XP_006720482 16 7355 XP_006714867 16 7355 XP_006714866 16 7355 XP_005268581 16 7355 NP_877963 15 9605 NP_002651 15 9605 NP_077285 15 9605 NP_001154999 15 9605 XP_005260495 15 9605 XP_006714185 15 9605 NP_001124 15 9605>NP_001185761 Length = 2240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>NP_071754 Length = 310 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 172 QKYEASRED 180>NP_001185763 Length = 2362 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>NP_001002810 Length = 173 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>NP_055459 Length = 2346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>NP_001182189 Length = 141 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 3 QKYEASRED 11>NP_001002812 Length = 969 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>NP_001182190 Length = 176 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 38 QKYEASRED 46>XP_006726410 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711719 Length = 2302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711717 Length = 2385 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711716 Length = 2411 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711715 Length = 2428 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>XP_006711714 Length = 2429 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 35 QKYEASRED 43>XP_006711713 Length = 2432 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 38 QKYEASRED 46>XP_006711710 Length = 2494 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711709 Length = 2495 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>XP_006711164 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q YEASRED Sbjct: 101 QKYEASRED 109>NP_060208 Length = 1406 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 QMY+ S+E+ Sbjct: 1211 QMYQKSKEE 1219>XP_006716856 Length = 1343 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 QMY+ S+E+ Sbjct: 1148 QMYQKSKEE 1156>XP_005251549 Length = 1405 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 QMY+ S+E+ Sbjct: 1210 QMYQKSKEE 1218>XP_006712027 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q +EA+RED Sbjct: 90 QEHEATRED 98>XP_005264245 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q +EA+RED Sbjct: 90 QEHEATRED 98>NP_689883 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 Q +EA+RED Sbjct: 90 QEHEATRED 98>NP_006436 Length = 2335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 ++Y A RED Sbjct: 2324 EVYSADRED 2332>NP_001193723 Length = 1312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 +MYEAS +D Sbjct: 586 KMYEASIKD 594>NP_057458 Length = 1312 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 +MYEAS +D Sbjct: 586 KMYEASIKD 594>XP_005273217 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMYEASRED 9 +MYEAS +D Sbjct: 586 KMYEASIKD 594>NP_001126 Length = 2431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EASRED 9 EASRED Sbjct: 2118 EASRED 2123>NP_037359 Length = 2530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EASRED 9 EASRED Sbjct: 2118 EASRED 2123>NP_789744 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 159 YDAKRED 165>NP_055055 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MYEASRE 8 MYEAS++ Sbjct: 20 MYEASKD 26>NP_036459 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 159 YDAKRED 165>NP_115997 Length = 2567 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 QM++ RED Sbjct: 1730 QMHQKDRED 1738>NP_775922 Length = 6996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EASRED 9 EASRED Sbjct: 3490 EASRED 3495>NP_258260 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 479 YQAGRED 485>XP_006724403 Length = 2449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 QM++ RED Sbjct: 1612 QMHQKDRED 1620>XP_005261845 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 QM++ RED Sbjct: 1731 QMHQKDRED 1739>XP_005261844 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 QM++ RED Sbjct: 1731 QMHQKDRED 1739>XP_005261843 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 QM++ RED Sbjct: 1731 QMHQKDRED 1739>XP_006720482 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 EASRED 9 EASRED Sbjct: 2118 EASRED 2123>XP_006714867 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 479 YQAGRED 485>XP_006714866 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 436 YQAGRED 442>XP_005268581 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 477 YQAGRED 483>NP_877963 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 802 YKAQRED 808>NP_002651 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 802 YKAQRED 808>NP_077285 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 Q Y ASR++ Sbjct: 228 QRYNASRDE 236>NP_001154999 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMYEASRED 9 Q Y ASR++ Sbjct: 121 QRYNASRDE 129>XP_005260495 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YEASRED 9 Y+A RED Sbjct: 802 YKAQRED 808>XP_006714185 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QMYEASRE 8 Q YE++RE Sbjct: 149 QAYESNRE 156>NP_001124 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QMYEASRE 8 Q YE++RE Sbjct: 149 QAYESNRE 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.115 0.289 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,024 Number of extensions: 941 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |