Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006720531 17 3301 XP_005254344 17 3301 NP_001542 17 4312 NP_005572 17 4312 NP_001013275 17 4312 NP_001819 17 4312 XP_006716315 17 4312 NP_001231800 16 5631 NP_001334 16 5631 NP_001099038 16 5631 NP_056312 16 5631 NP_001099037 16 5631 NP_001099036 16 5631 NP_071396 16 5631 NP_001273416 16 5631 XP_006715230 16 5631 XP_006715229 16 5631 XP_005249350 16 5631 XP_005249349 16 5631 XP_005249348 16 5631 XP_005249347 16 5631 XP_005249346 16 5631 XP_006710090 16 5631 NP_000584 16 7355 NP_078966 16 7355 NP_056362 16 7355 NP_001005169 16 7355 NP_001005170 16 7355 NP_001005161 15 9605 NP_003038 15 9605 NP_631938 15 9605 NP_006687 15 9605 NP_001157798 15 9605 NP_005964 15 9605 XP_005260679 15 9605 XP_005271922 15 9605 XP_005271921 15 9605 XP_005271918 15 9605 XP_006714588 15 9605 XP_005271917 15 9605 XP_005271912 15 9605 XP_005271916 15 9605 XP_005271914 15 9605 XP_006714587 15 9605 XP_005271913 15 9605 XP_005245371 15 9605 XP_005245370 15 9605 XP_006711370 15 9605 NP_055557 15 9605>XP_006720531 Length = 415 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MWISISLT 9 +WI ISLT Sbjct: 236 LWIFISLT 243>XP_005254344 Length = 556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MWISISLT 9 +WI ISLT Sbjct: 377 LWIFISLT 384>NP_001542 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QMWISISL 8 Q WI ISL Sbjct: 198 QRWIDISL 205>NP_005572 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W+S SLT Sbjct: 500 QGWVSSSLT 508>NP_001013275 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W+S SLT Sbjct: 500 QGWVSSSLT 508>NP_001819 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q+W ISLT Sbjct: 125 QVWRDISLT 133>XP_006716315 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W S+SLT Sbjct: 410 QDWSSVSLT 418>NP_001231800 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QMWISISLT 9 ++W++ISL+ Sbjct: 92 RIWVNISLS 100>NP_001334 Length = 770 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QMWISISLT 9 ++W++ISL+ Sbjct: 92 RIWVNISLS 100>NP_001099038 Length = 1749 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 990 EMWISI 995>NP_056312 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 WISISLT 9 WI ISLT Sbjct: 377 WIFISLT 383>NP_001099037 Length = 1757 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 990 EMWISI 995>NP_001099036 Length = 1770 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 990 EMWISI 995>NP_071396 Length = 1805 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 990 EMWISI 995>NP_001273416 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 WISISLT 9 WI ISLT Sbjct: 316 WIFISLT 322>XP_006715230 Length = 1734 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 919 EMWISI 924>XP_006715229 Length = 1782 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 967 EMWISI 972>XP_005249350 Length = 1810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 1030 EMWISI 1035>XP_005249349 Length = 1824 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 1030 EMWISI 1035>XP_005249348 Length = 1832 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 1030 EMWISI 1035>XP_005249347 Length = 1837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 1030 EMWISI 1035>XP_005249346 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMWISI 6 +MWISI Sbjct: 1030 EMWISI 1035>XP_006710090 Length = 255 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QMWISISLT 9 ++WI +SLT Sbjct: 2 KIWIFLSLT 10>NP_000584 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MWISISLT 9 +W S+SLT Sbjct: 381 LWGSVSLT 388>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 WISISLT 9 W+S SLT Sbjct: 1460 WLSTSLT 1466>NP_056362 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 WISISLT 9 W+ +SLT Sbjct: 546 WVRVSLT 552>NP_001005169 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MWISISLT 9 +W++ISL+ Sbjct: 29 LWLAISLS 36>NP_001005170 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MWISISLT 9 +W++ISL+ Sbjct: 55 LWLAISLS 62>NP_001005161 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 MWISI 6 MWISI Sbjct: 27 MWISI 31>NP_003038 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 +MW S+S T Sbjct: 384 KMWSSVSET 392>NP_631938 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>NP_006687 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>NP_001157798 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>NP_005964 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W++ SLT Sbjct: 423 QQWMTKSLT 431>XP_005260679 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 MWISISL 8 MW ISL Sbjct: 438 MWFGISL 444>XP_005271922 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271921 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271918 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_006714588 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271917 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271912 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271916 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271914 Length = 1238 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_006714587 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005271913 Length = 1293 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 QMWISIS 7 Q W+S+S Sbjct: 37 QNWVSVS 43>XP_005245371 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W++ SLT Sbjct: 391 QQWMTKSLT 399>XP_005245370 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMWISISLT 9 Q W++ SLT Sbjct: 455 QQWMTKSLT 463>XP_006711370 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MWISISLT 9 +W SISL+ Sbjct: 219 IWTSISLS 226>NP_055557 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 MWISISL 8 MW ISL Sbjct: 455 MWFGISL 461Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.124 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 625,772 Number of extensions: 528 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |