Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 21 229 XP_005251512 21 229 NP_001243687 20 509 XP_006722543 20 509 NP_689683 20 509 NP_068598 17 3301 NP_620709 17 4312 NP_620708 17 4312 NP_001274433 16 5631 NP_055491 16 5631 NP_001018494 16 5631 XP_005246870 16 5631 XP_005246869 16 5631 NP_001123917 16 5631 NP_001274432 16 5631 NP_006742 16 5631 NP_001001976 16 7355 NP_001275663 16 7355 NP_004362 16 7355 NP_001091868 16 7355 NP_056132 16 7355 NP_001269720 16 7355 NP_001269681 16 7355 NP_001269719 16 7355 NP_116270 16 7355 XP_005269518 16 7355 XP_005269516 16 7355 XP_005269515 16 7355 XP_005269513 16 7355 XP_005262667 16 7355 XP_005262666 16 7355 XP_006712038 16 7355 XP_006712037 16 7355 XP_006712036 16 7355 XP_006712035 16 7355 XP_005262664 16 7355 NP_001004700 16 7355 NP_115532 15 9605 NP_076414 15 9605 NP_001002259 15 9605 NP_149043 15 9605 NP_001193785 15 9605 NP_003647 15 9605 NP_008859 15 9605 NP_775107 15 9605 NP_001073906 15 9605 NP_001264262 15 9605 NP_001161946 15 9605 NP_079161 15 9605 NP_001186982 15 9605 NP_001186983 15 9605 XP_005262209 15 9605 XP_005262208 15 9605 XP_006724727 15 9605 XP_003959998 15 9605 XP_006719632 15 9605 XP_006719631 15 9605 XP_006719210 15 9605 XP_006719209 15 9605 XP_006719208 15 9605 XP_006719207 15 9605 XP_006719206 15 9605 XP_006719205 15 9605 XP_006719204 15 9605 XP_006719203 15 9605 XP_006719202 15 9605 XP_006719201 15 9605 XP_006719200 15 9605 XP_005265573 15 9605 XP_006712470 15 9605 XP_006712469 15 9605 XP_006712468 15 9605 XP_005247054 15 9605>NP_004963 Length = 1132 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMVLHKIRN 9 QMV HKIRN Sbjct: 534 QMVFHKIRN 542>XP_005251512 Length = 1132 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QMVLHKIRN 9 QMV HKIRN Sbjct: 534 QMVFHKIRN 542>NP_001243687 Length = 154 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 QMVLHKIRN 9 QMV+H+IRN Sbjct: 12 QMVVHEIRN 20>XP_006722543 Length = 369 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 QMVLHKIRN 9 QMV+H+IRN Sbjct: 227 QMVVHEIRN 235>NP_689683 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 QMVLHKIRN 9 QMV+H+IRN Sbjct: 204 QMVVHEIRN 212>NP_068598 Length = 764 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 +++LHK+R Sbjct: 145 ELILHKVR 152>NP_620709 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 +MVLHK+ Sbjct: 217 EMVLHKV 223>NP_620708 Length = 382 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 +MVLHK+ Sbjct: 217 EMVLHKV 223>NP_001274433 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 763 VLHDIRN 769>NP_055491 Length = 1186 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++V+HKIR Sbjct: 1138 KIVMHKIR 1145>NP_001018494 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++V+HKIR Sbjct: 1140 KIVMHKIR 1147>XP_005246870 Length = 1252 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 916 VLHDIRN 922>XP_005246869 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 916 VLHDIRN 922>NP_001123917 Length = 1259 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 916 VLHDIRN 922>NP_001274432 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 916 VLHDIRN 922>NP_006742 Length = 1256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH IRN Sbjct: 916 VLHDIRN 922>NP_001001976 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 299 QMVIHK 304>NP_001275663 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 184 QMVIHK 189>NP_004362 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH +RN Sbjct: 611 VLHMVRN 617>NP_001091868 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VLHKIRN 9 VLH +RN Sbjct: 620 VLHMVRN 626>NP_056132 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 1016 KIIMHKIR 1023>NP_001269720 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 881 KIIMHKIR 888>NP_001269681 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 960 KIIMHKIR 967>NP_001269719 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 937 KIIMHKIR 944>NP_116270 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 VLHKIRN 9 ++H++RN Sbjct: 100 IIHRVRN 106>XP_005269518 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 316 QMVIHK 321>XP_005269516 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 292 QMVIHK 297>XP_005269515 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 299 QMVIHK 304>XP_005269513 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QMVLHK 6 QMV+HK Sbjct: 316 QMVIHK 321>XP_005262667 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 937 KIIMHKIR 944>XP_005262666 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 939 KIIMHKIR 946>XP_006712038 Length = 1010 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 962 KIIMHKIR 969>XP_006712037 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 1018 KIIMHKIR 1025>XP_006712036 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 1018 KIIMHKIR 1025>XP_006712035 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 1018 KIIMHKIR 1025>XP_005262664 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QMVLHKIR 8 ++++HKIR Sbjct: 1018 KIIMHKIR 1025>NP_001004700 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MVLHKIRN 9 ++LH +RN Sbjct: 218 VILHSLRN 225>NP_115532 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>NP_076414 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>NP_001002259 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>NP_149043 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 882 HKIRN 886>NP_001193785 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>NP_003647 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHKIRN 9 VLHKI++ Sbjct: 69 VLHKIKH 75>NP_008859 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 Q+VLH+I Sbjct: 551 QLVLHQI 557>NP_775107 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHK++N Sbjct: 379 LHKVKN 384>NP_001073906 Length = 1413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMVLHKIRN 9 Q LH+IR+ Sbjct: 1024 QWALHRIRH 1032>NP_001264262 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLHKIRN 9 ++HKI+N Sbjct: 331 LIHKIKN 337>NP_001161946 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHKI+N Sbjct: 319 LHKIQN 324>NP_079161 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHKI+N Sbjct: 405 LHKIQN 410>NP_001186982 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 Q+VLH+I Sbjct: 465 QLVLHQI 471>NP_001186983 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 Q+VLH+I Sbjct: 551 QLVLHQI 557>XP_005262209 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHKI+N Sbjct: 320 LHKIQN 325>XP_005262208 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHKI+N Sbjct: 331 LHKIQN 336>XP_006724727 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LHKIRN 9 LHKI+N Sbjct: 406 LHKIQN 411>XP_003959998 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VLHKIRN 9 ++HKI+N Sbjct: 53 LIHKIKN 59>XP_006719632 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 Q+VLH+I Sbjct: 551 QLVLHQI 557>XP_006719631 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QMVLHKI 7 Q+VLH+I Sbjct: 554 QLVLHQI 560>XP_006719210 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719209 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719208 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719207 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719206 Length = 1046 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 50 HKIRN 54>XP_006719205 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719204 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719203 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719202 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719201 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_006719200 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HKIRN 9 HKIRN Sbjct: 131 HKIRN 135>XP_005265573 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLHKIRN 9 VLHKI++ Sbjct: 69 VLHKIKH 75>XP_006712470 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMVLHKIRN 9 Q LH+IR+ Sbjct: 1024 QWALHRIRH 1032>XP_006712469 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMVLHKIRN 9 Q LH+IR+ Sbjct: 1024 QWALHRIRH 1032>XP_006712468 Length = 1413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMVLHKIRN 9 Q LH+IR+ Sbjct: 1024 QWALHRIRH 1032>XP_005247054 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMVLHKIRN 9 Q LH+IR+ Sbjct: 1024 QWALHRIRH 1032Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.139 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 481,650 Number of extensions: 534 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |