Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_001254652 17 4312 XP_005259249 17 4312 XP_005259248 17 4312 NP_001185731 16 5631 NP_001185730 16 5631 NP_006036 16 5631 NP_003751 16 5631 NP_001012989 16 7355 NP_001013859 15 9605 NP_001013858 15 9605 NP_003541 15 9605 NP_004757 15 9605 XP_005249935 15 9605 XP_005249934 15 9605 XP_006715851 15 9605 XP_005249933 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QMLEMEVEL 9 QMLEM+VEL Sbjct: 3132 QMLEMQVEL 3140>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QMLEMEVEL 9 QMLEM+VEL Sbjct: 3124 QMLEMQVEL 3132>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QMLEMEVEL 9 QMLEM+VEL Sbjct: 3085 QMLEMQVEL 3093>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QMLEMEVEL 9 QMLEM+VEL Sbjct: 3164 QMLEMQVEL 3172>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QMLEMEVEL 9 QMLEM+VEL Sbjct: 3177 QMLEMQVEL 3185>NP_001254652 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QMLEMEVE 8 Q+LE+EVE Sbjct: 27 QVLELEVE 34>XP_005259249 Length = 512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QMLEMEVE 8 Q+LE+EVE Sbjct: 27 QVLELEVE 34>XP_005259248 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QMLEMEVE 8 Q+LE+EVE Sbjct: 35 QVLELEVE 42>NP_001185731 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMLEMEVEL 9 +MLE E+EL Sbjct: 527 EMLEAELEL 535>NP_001185730 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMLEMEVEL 9 +MLE E+EL Sbjct: 520 EMLEAELEL 528>NP_006036 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMLEMEVEL 9 + LEME+EL Sbjct: 637 ESLEMEMEL 645>NP_003751 Length = 1585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QMLEMEVEL 9 +MLE E+EL Sbjct: 521 EMLEAELEL 529>NP_001012989 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 ++E+EVEL Sbjct: 116 LMELEVEL 123>NP_001013859 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 472 MLEMELKM 479>NP_001013858 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 472 MLEMELKM 479>NP_003541 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 472 MLEMELKM 479>NP_004757 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 +LE+EV+L Sbjct: 877 LLELEVDL 884>XP_005249935 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 425 MLEMELKM 432>XP_005249934 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 425 MLEMELKM 432>XP_006715851 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 472 MLEMELKM 479>XP_005249933 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLEMEVEL 9 MLEME+++ Sbjct: 472 MLEMELKM 479Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.130 0.294 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,392 Number of extensions: 620 Number of successful extensions: 21 Number of sequences better than 10000.0: 21 Number of HSP's gapped: 21 Number of HSP's successfully gapped: 21 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |