Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001188476 17 3301 NP_004687 17 3301 NP_001188477 17 3301 NP_001188475 17 3301 XP_006711096 17 3301 XP_005271374 17 3301 XP_005259315 17 4312 XP_005259314 17 4312 NP_077297 17 4312 NP_000231 16 5631 NP_001257387 16 5631 NP_438170 16 5631 NP_001229241 16 5631 NP_659456 16 5631 NP_077015 16 5631 NP_001244899 16 5631 NP_002105 16 7355 NP_060033 16 7355 NP_004362 16 7355 NP_001091868 16 7355 NP_055506 16 7355 NP_001157879 16 7355 XP_005257166 16 7355 XP_006721795 16 7355 XP_006721794 16 7355 XP_005249099 16 7355 XP_006713272 16 7355 XP_005265295 16 7355 NP_001137276 16 7355 NP_848595 16 7355 NP_853553 15 9605 NP_001264268 15 9605 NP_055524 15 9605 NP_001157973 15 9605 NP_001002909 15 9605 NP_062817 15 9605 XP_005261745 15 9605 XP_005261744 15 9605 XP_005261743 15 9605 XP_006724347 15 9605 XP_006724346 15 9605 XP_006724345 15 9605 XP_006724344 15 9605 XP_006721846 15 9605 XP_006721845 15 9605 XP_006721844 15 9605 XP_005254538 15 9605 XP_005266849 15 9605 XP_005264449 15 9605 NP_001157974 15 9605 NP_115750 15 9605>NP_001188476 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 131 MLLRPIHI 138>NP_004687 Length = 487 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 193 MLLRPIHI 200>NP_001188477 Length = 382 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 83 MLLRPIHI 90>NP_001188475 Length = 439 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 145 MLLRPIHI 152>XP_006711096 Length = 377 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 83 MLLRPIHI 90>XP_005271374 Length = 487 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M LRP+H+ Sbjct: 193 MLLRPIHI 200>XP_005259315 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 MALRP H Sbjct: 154 MALRPPH 160>XP_005259314 Length = 473 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 MALRP H Sbjct: 176 MALRPPH 182>NP_077297 Length = 480 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 MALRP H Sbjct: 183 MALRPPH 189>NP_000231 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QMALRPVH 8 Q AL PVH Sbjct: 384 QEALHPVH 391>NP_001257387 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QMALRPVH 8 Q AL PVH Sbjct: 251 QEALHPVH 258>NP_438170 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QMALRP 6 QMALRP Sbjct: 369 QMALRP 374>NP_001229241 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ALRPVH 8 A+RPVH Sbjct: 161 AIRPVH 166>NP_659456 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ALRPVH 8 A+RPVH Sbjct: 197 AIRPVH 202>NP_077015 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QMALRP 6 QMALRP Sbjct: 606 QMALRP 611>NP_001244899 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QMALRP 6 QMALRP Sbjct: 606 QMALRP 611>NP_002105 Length = 2718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M L+PVH+ Sbjct: 511 MELQPVHI 518>NP_060033 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ALRPVH 8 AL+PVH Sbjct: 286 ALKPVH 291>NP_004362 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRPVHM 9 L+PVHM Sbjct: 1096 LQPVHM 1101>NP_001091868 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRPVHM 9 L+PVHM Sbjct: 1105 LQPVHM 1110>NP_055506 Length = 1485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QMALRPVHM 9 Q+ RP+H+ Sbjct: 1322 QLTARPLHL 1330>NP_001157879 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QMALRPVH 8 QMA P+H Sbjct: 65 QMAADPIH 72>XP_005257166 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 +ALRP H Sbjct: 158 LALRPFH 164>XP_006721795 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 +ALRP H Sbjct: 241 LALRPFH 247>XP_006721794 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 +ALRP H Sbjct: 241 LALRPFH 247>XP_005249099 Length = 2026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MALRPVHM 9 M L+PVH+ Sbjct: 511 MELQPVHI 518>XP_006713272 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ALRPVH 8 AL+PVH Sbjct: 142 ALKPVH 147>XP_005265295 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ALRPVH 8 AL+PVH Sbjct: 258 ALKPVH 263>NP_001137276 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 +ALRP H Sbjct: 183 LALRPFH 189>NP_848595 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MALRPVH 8 +ALRP H Sbjct: 158 LALRPFH 164>NP_853553 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 226 LRPVH 230>NP_001264268 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 417 LRPVH 421>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 2384 LRPVH 2388>NP_001157973 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 805 LRPVH 809>NP_001002909 Length = 1502 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ALRPVHM 9 AL+P+H+ Sbjct: 1355 ALQPIHI 1361>NP_062817 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 805 LRPVH 809>XP_005261745 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 806 LRPVH 810>XP_005261744 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 806 LRPVH 810>XP_005261743 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 806 LRPVH 810>XP_006724347 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 822 LRPVH 826>XP_006724346 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 823 LRPVH 827>XP_006724345 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 846 LRPVH 850>XP_006724344 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 847 LRPVH 851>XP_006721846 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ALRPVHM 9 AL+P+H+ Sbjct: 1277 ALQPIHI 1283>XP_006721845 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ALRPVHM 9 AL+P+H+ Sbjct: 1277 ALQPIHI 1283>XP_006721844 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 ALRPVHM 9 AL+P+H+ Sbjct: 1277 ALQPIHI 1283>XP_005254538 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QMALRPVHM 9 +MALRP + Sbjct: 975 EMALRPTKL 983>XP_005266849 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 417 LRPVH 421>XP_005264449 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 283 LRPVH 287>NP_001157974 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 631 LRPVH 635>NP_115750 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LRPVH 8 LRPVH Sbjct: 78 LRPVH 82Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.134 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,978 Number of extensions: 493 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |