Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 19 665 NP_660153 16 5631 NP_001159749 16 5631 NP_001007232 16 5631 NP_055697 16 5631 NP_001159748 16 5631 XP_006717674 16 5631 XP_006717673 16 5631 XP_006717672 16 5631 XP_005269546 16 5631 XP_005269545 16 5631 XP_006717671 16 5631 XP_006717670 16 5631 XP_006717669 16 5631 XP_006717668 16 5631 XP_006717667 16 5631 XP_005264733 16 5631 XP_005264732 16 5631 NP_000368 16 7355 NP_055950 16 7355 NP_001275682 16 7355 NP_005487 16 7355 NP_001002800 16 7355 XP_005266998 16 7355 NP_116191 15 9605 NP_001277622 15 9605 NP_079174 15 9605 NP_001277260 15 9605 NP_055524 15 9605 NP_004652 15 9605 NP_060890 15 9605 XP_006722969 15 9605 XP_006722968 15 9605 XP_005259703 15 9605 XP_005254781 15 9605 XP_005254780 15 9605 XP_005254779 15 9605 XP_006710817 15 9605 XP_005271062 15 9605 XP_005271061 15 9605 XP_006710816 15 9605>NP_004110 Length = 993 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QL DAEEAM Sbjct: 946 QLADAEEAM 954>NP_660153 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1048 ELTEAEDAL 1056>NP_001159749 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 221 QLTNADEA 228>NP_001007232 Length = 646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 261 QLTNADEA 268>NP_055697 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 253 QLTNADEA 260>NP_001159748 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 254 QLTNADEA 261>XP_006717674 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 856 ELTEAEDAL 864>XP_006717673 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 856 ELTEAEDAL 864>XP_006717672 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 856 ELTEAEDAL 864>XP_005269546 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 856 ELTEAEDAL 864>XP_005269545 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 978 ELTEAEDAL 986>XP_006717671 Length = 1091 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1018 ELTEAEDAL 1026>XP_006717670 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1047 ELTEAEDAL 1055>XP_006717669 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1047 ELTEAEDAL 1055>XP_006717668 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1048 ELTEAEDAL 1056>XP_006717667 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +LT+AE+A+ Sbjct: 1048 ELTEAEDAL 1056>XP_005264733 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 222 QLTNADEA 229>XP_005264732 Length = 645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT+A+EA Sbjct: 260 QLTNADEA 267>NP_000368 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QLTDAE 6 QLTDAE Sbjct: 280 QLTDAE 285>NP_055950 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 + T+A+EAM Sbjct: 351 EFTEADEAM 359>NP_001275682 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 494 QLTKAKEAL 502>NP_005487 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 519 QLTKAKEAL 527>NP_001002800 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 519 QLTKAKEAL 527>XP_005266998 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TDAEEA 8 TDAEEA Sbjct: 610 TDAEEA 615>NP_116191 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 21 QLTAAQEAI 29>NP_001277622 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QLTDAEE 7 ++TDAEE Sbjct: 51 EVTDAEE 57>NP_079174 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 Q+T+AEE + Sbjct: 122 QVTEAEELL 130>NP_001277260 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 Q+T+AEE + Sbjct: 78 QVTEAEELL 86>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 +L+D EE+M Sbjct: 553 RLSDTEESM 561>NP_004652 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QLTDAEEA 8 QLT++E+A Sbjct: 479 QLTESEQA 486>NP_060890 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +L++AEEA+ Sbjct: 257 RLSEAEEAL 265>XP_006722969 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 Q+T+AEE + Sbjct: 78 QVTEAEELL 86>XP_006722968 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 Q+T+AEE + Sbjct: 259 QVTEAEELL 267>XP_005259703 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 Q+T+AEE + Sbjct: 259 QVTEAEELL 267>XP_005254781 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 21 QLTAAQEAI 29>XP_005254780 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 21 QLTAAQEAI 29>XP_005254779 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLTDAEEAM 9 QLT A+EA+ Sbjct: 21 QLTAAQEAI 29>XP_006710817 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +L++AEEA+ Sbjct: 25 RLSEAEEAL 33>XP_005271062 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +L++AEEA+ Sbjct: 26 RLSEAEEAL 34>XP_005271061 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +L++AEEA+ Sbjct: 257 RLSEAEEAL 265>XP_006710816 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QLTDAEEAM 9 +L++AEEA+ Sbjct: 186 RLSEAEEAL 194Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.110 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,902 Number of extensions: 897 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |