Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 19 665 XP_005250103 19 665 XP_005250102 19 665 NP_002871 18 1935 XP_005265417 18 1935 XP_005265416 18 1935 XP_005265415 18 1935 XP_005265414 18 1935 XP_005265412 18 1935 NP_996816 16 5631 NP_001243125 16 5631 NP_001645 16 5631 NP_078787 16 5631 NP_065073 16 5631 XP_006724592 16 5631 XP_006715582 16 5631 NP_061947 16 7355 NP_848599 16 7355 NP_001275896 16 7355 NP_001275894 16 7355 NP_077817 16 7355 NP_066022 16 7355 NP_001275893 16 7355 XP_006723369 16 7355 XP_005247869 16 7355 XP_006713830 16 7355 XP_005247867 16 7355 XP_005247863 16 7355 XP_005247862 16 7355 XP_005247861 16 7355 XP_005247860 16 7355 XP_005247859 16 7355 XP_006713081 16 7355 NP_002372 15 9605 NP_003820 15 9605 NP_001248335 15 9605 NP_055178 15 9605 NP_001248336 15 9605 NP_001264984 15 9605 NP_775821 15 9605 XP_005266395 15 9605 XP_006716955 15 9605 XP_005251680 15 9605 XP_006716954 15 9605 XP_006716953 15 9605 XP_006716952 15 9605 XP_006716951 15 9605 XP_006716950 15 9605 XP_006716949 15 9605 XP_006716948 15 9605 XP_005251679 15 9605 XP_005251455 15 9605 XP_005251456 15 9605 XP_005251454 15 9605>NP_004324 Length = 766 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 QLQAF NEV Sbjct: 494 QLQAFKNEV 502>XP_005250103 Length = 758 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 QLQAF NEV Sbjct: 494 QLQAFKNEV 502>XP_005250102 Length = 767 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 QLQAF NEV Sbjct: 494 QLQAFKNEV 502>NP_002871 Length = 648 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 386 QFQAFRNEV 394>XP_005265417 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 386 QFQAFRNEV 394>XP_005265416 Length = 534 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 272 QFQAFRNEV 280>XP_005265415 Length = 567 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 305 QFQAFRNEV 313>XP_005265414 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 353 QFQAFRNEV 361>XP_005265412 Length = 648 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NEV Sbjct: 386 QFQAFRNEV 394>NP_996816 Length = 5202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQAFTN 7 LQAFTN Sbjct: 4795 LQAFTN 4800>NP_001243125 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NE+ Sbjct: 350 QAQAFKNEM 358>NP_001645 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NE+ Sbjct: 347 QAQAFKNEM 355>NP_078787 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 +LQA T+EV Sbjct: 165 ELQALTDEV 173>NP_065073 Length = 2177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 Q+QA+TN V Sbjct: 2112 QIQAWTNMV 2120>XP_006724592 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 Q QAF NE+ Sbjct: 352 QAQAFKNEM 360>XP_006715582 Length = 2106 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLQAFTNEV 9 Q+QA+TN V Sbjct: 2041 QIQAWTNMV 2049>NP_061947 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QLQAFTNE 8 QLQ F NE Sbjct: 33 QLQEFINE 40>NP_848599 Length = 3092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QLQAFTNE 8 QLQ F NE Sbjct: 2684 QLQLFINE 2691>NP_001275896 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 415 QAFTNDL 421>NP_001275894 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 547 QAFTNDL 553>NP_077817 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 567 QAFTNDL 573>NP_066022 Length = 2564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QLQAFT 6 QLQAFT Sbjct: 347 QLQAFT 352>NP_001275893 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 549 QAFTNDL 555>XP_006723369 Length = 2394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QLQAFT 6 QLQAFT Sbjct: 347 QLQAFT 352>XP_005247869 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 308 QAFTNDL 314>XP_006713830 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 391 QAFTNDL 397>XP_005247867 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 415 QAFTNDL 421>XP_005247863 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247862 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247861 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 547 QAFTNDL 553>XP_005247860 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247859 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QAFTNEV 9 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_006713081 Length = 3964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QLQAFTNE 8 QLQ F NE Sbjct: 3556 QLQLFINE 3563>NP_002372 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QLQAFTNE 8 QLQA+T++ Sbjct: 136 QLQAYTDK 143>NP_003820 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>NP_001248335 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 QL+ TN+V Sbjct: 4515 QLEGLTNDV 4523>NP_001248336 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 QL+ TN+V Sbjct: 4368 QLEGLTNDV 4376>NP_775821 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQAFTNE 8 +LQA TNE Sbjct: 122 ELQAKTNE 129>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QLQAFTNEV 9 QL+ TN+V Sbjct: 4524 QLEGLTNDV 4532>XP_006716955 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_005251680 Length = 2000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716954 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716953 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716952 Length = 2037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716951 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716950 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716949 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_006716948 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_005251679 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LQAFTNE 8 LQ FTN+ Sbjct: 436 LQGFTNQ 442>XP_005251455 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQAFTNE 8 +LQA TNE Sbjct: 122 ELQAKTNE 129>XP_005251456 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQAFTNE 8 +LQA TNE Sbjct: 122 ELQAKTNE 129>XP_005251454 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLQAFTNE 8 +LQA TNE Sbjct: 122 ELQAKTNE 129Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.124 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,995 Number of extensions: 711 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |