Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 18 1482 XP_005250103 18 1482 XP_005250102 18 1482 NP_203751 17 3301 XP_006714457 17 3301 XP_006714456 17 3301 XP_005263376 17 3301 NP_000866 16 5631 NP_212133 16 5631 NP_940938 16 5631 NP_001138888 16 5631 XP_005259958 16 5631 XP_005259957 16 5631 XP_005259959 16 5631 XP_005259956 16 5631 XP_005259955 16 5631 XP_005254953 16 5631 XP_006720550 16 5631 XP_006720549 16 5631 NP_689585 16 7355 NP_579872 16 7355 NP_001139669 16 7355 NP_954981 16 7355 NP_036492 16 7355 NP_005912 15 9605 NP_055523 15 9605 NP_009121 15 9605 NP_001258966 15 9605 NP_001137359 15 9605 NP_001128248 15 9605 NP_001128247 15 9605 NP_663782 15 9605 NP_004227 15 9605 NP_071940 15 9605 NP_065907 15 9605 NP_001118 15 9605 NP_659428 15 9605 NP_065810 15 9605 NP_055646 15 9605 XP_005261214 15 9605 XP_006720684 15 9605 XP_005268066 15 9605 XP_006719769 15 9605 XP_006718728 15 9605 XP_005274241 15 9605 XP_005274240 15 9605 XP_005274239 15 9605 XP_005269527 15 9605 XP_005269526 15 9605 XP_005248577 15 9605 XP_005248576 15 9605 XP_006713495 15 9605 NP_001159491 15 9605 NP_073733 15 9605>NP_004324 Length = 766 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 QL LLFVSK Sbjct: 285 QLDLLFVSK 293>XP_005250103 Length = 758 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 QL LLFVSK Sbjct: 285 QLDLLFVSK 293>XP_005250102 Length = 767 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 QL LLFVSK Sbjct: 285 QLDLLFVSK 293>NP_203751 Length = 1143 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QLHLLFV 7 +LHLLFV Sbjct: 376 ELHLLFV 382>XP_006714457 Length = 809 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QLHLLFV 7 +LHLLFV Sbjct: 42 ELHLLFV 48>XP_006714456 Length = 1143 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QLHLLFV 7 +LHLLFV Sbjct: 376 ELHLLFV 382>XP_005263376 Length = 1143 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QLHLLFV 7 +LHLLFV Sbjct: 376 ELHLLFV 382>NP_000866 Length = 1367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH+L +SK Sbjct: 59 LHILLISK 66>NP_212133 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>NP_940938 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>NP_001138888 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005259958 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005259957 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005259959 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005259956 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005259955 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QLHLLFVS 8 QL+LLF+S Sbjct: 88 QLYLLFLS 95>XP_005254953 Length = 1366 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH+L +SK Sbjct: 59 LHILLISK 66>XP_006720550 Length = 1373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH+L +SK Sbjct: 66 LHILLISK 73>XP_006720549 Length = 1374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH+L +SK Sbjct: 66 LHILLISK 73>NP_689585 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 +LHL+F +K Sbjct: 1036 ELHLIFNNK 1044>NP_579872 Length = 59 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LHLLF+ + Sbjct: 29 LHLLFLKR 36>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LHL+ VSK Sbjct: 541 LHLISVSK 548>NP_954981 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 H+LF+SK Sbjct: 135 HVLFLSK 141>NP_036492 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLHLLFV 7 Q HLLFV Sbjct: 23 QQHLLFV 29>NP_005912 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 +HLLFV Sbjct: 356 IHLLFV 361>NP_055523 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QLHLLF 6 QLHL+F Sbjct: 78 QLHLVF 83>NP_009121 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH LF+S+ Sbjct: 562 LHALFMSR 569>NP_001258966 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QLHLLFV 7 QLH LF+ Sbjct: 59 QLHFLFL 65>NP_001137359 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 ++H+ F+SK Sbjct: 375 RIHIPFISK 383>NP_001128248 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>NP_001128247 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>NP_663782 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 LH+LFV Sbjct: 824 LHILFV 829>NP_004227 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QLHLLFVSK 9 ++H+ F+SK Sbjct: 368 RIHIPFISK 376>NP_071940 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 LH+LFV Sbjct: 11 LHILFV 16>NP_065907 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLL+VS+ Sbjct: 1071 HLLYVSE 1077>NP_001118 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 LH+LFV Sbjct: 831 LHILFV 836>NP_659428 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QLHLLFV 7 QLH LF+ Sbjct: 127 QLHFLFL 133>NP_065810 Length = 4700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLHLLFVS 8 QLH +F+S Sbjct: 843 QLHSIFLS 850>NP_055646 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH +FV+K Sbjct: 1146 LHQIFVTK 1153>XP_005261214 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QLHLLFV 7 QLH LF+ Sbjct: 59 QLHFLFL 65>XP_006720684 Length = 4713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLHLLFVS 8 QLH +F+S Sbjct: 856 QLHSIFLS 863>XP_005268066 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 LH+LFV Sbjct: 245 LHILFV 250>XP_006719769 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QLHLLF 6 QLHL+F Sbjct: 78 QLHLVF 83>XP_006718728 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274241 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274240 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274239 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005269527 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH LF+S+ Sbjct: 515 LHALFMSR 522>XP_005269526 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH LF+S+ Sbjct: 562 LHALFMSR 569>XP_005248577 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 +HLLFV Sbjct: 193 IHLLFV 198>XP_005248576 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 +HLLFV Sbjct: 219 IHLLFV 224>XP_006713495 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LHLLFVSK 9 LH +FV+K Sbjct: 1190 LHQIFVTK 1197>NP_001159491 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LHLLFV 7 LH+LFV Sbjct: 804 LHILFV 809>NP_073733 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLLFVSK 9 HLLF+S+ Sbjct: 136 HLLFMSQ 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.146 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 557,931 Number of extensions: 907 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |