Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_000121 16 5631 NP_001123492 16 5631 NP_001123493 16 5631 NP_116202 16 5631 NP_001007472 16 5631 NP_005168 16 5631 NP_001073137 16 5631 XP_006724407 16 5631 XP_005261847 16 5631 XP_005257520 16 5631 XP_005257518 16 5631 XP_005257516 16 5631 XP_005254137 16 5631 XP_006720017 16 5631 NP_001092764 16 5631 NP_001229679 16 5631 NP_115823 16 7355 XP_006722988 16 7355 NP_742107 15 9605 NP_004870 15 9605 NP_001277064 15 9605 NP_689899 15 9605 NP_054772 15 9605 NP_660204 15 9605 NP_001020276 15 9605 NP_997724 15 9605 NP_115598 15 9605 NP_001258671 15 9605 NP_001258670 15 9605 NP_071737 15 9605 NP_001883 15 9605 NP_878905 15 9605 XP_006714631 15 9605 XP_006714630 15 9605 XP_005271975 15 9605 XP_005271974 15 9605 XP_005265446 15 9605 XP_005265445 15 9605 NP_005469 15 9605 NP_001128350 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 QLFS LFSG Sbjct: 2807 QLFSSLFSG 2815>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 QLFS LFSG Sbjct: 2807 QLFSSLFSG 2815>NP_000121 Length = 2224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 +LFSI F+G Sbjct: 265 ELFSIHFNG 273>NP_001123492 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 445 EMFSTVFSG 453>NP_001123493 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 438 EMFSTVFSG 446>NP_116202 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFSILFSG 9 +FS+LF G Sbjct: 144 VFSVLFGG 151>NP_001007472 Length = 1707 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLFSILFS 8 Q+FS LFS Sbjct: 15 QVFSFLFS 22>NP_005168 Length = 831 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 438 EMFSTVFSG 446>NP_001073137 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFSILFSG 9 +FS+LF G Sbjct: 125 VFSVLFGG 132>XP_006724407 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFSILFS 8 LFS+LFS Sbjct: 15 LFSLLFS 21>XP_005261847 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFSILFS 8 LFS+LFS Sbjct: 15 LFSLLFS 21>XP_005257520 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 445 EMFSTVFSG 453>XP_005257518 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 445 EMFSTVFSG 453>XP_005257516 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLFSILFSG 9 ++FS +FSG Sbjct: 445 EMFSTVFSG 453>XP_005254137 Length = 632 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFSILFSG 9 +FS+LF G Sbjct: 144 VFSVLFGG 151>XP_006720017 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LFSILFSG 9 +FS+LF G Sbjct: 125 VFSVLFGG 132>NP_001092764 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFSILFS 8 LFS+LFS Sbjct: 15 LFSLLFS 21>NP_001229679 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LFSILFS 8 LFSI+FS Sbjct: 47 LFSIIFS 53>NP_115823 Length = 2809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 296 FSVLFGG 302>XP_006722988 Length = 2818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 305 FSVLFGG 311>NP_742107 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QLFSILFS 8 QLF LFS Sbjct: 383 QLFHFLFS 390>NP_004870 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFSILF 7 LFSILF Sbjct: 265 LFSILF 270>NP_001277064 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LFSILF 7 LFSILF Sbjct: 251 LFSILF 256>NP_689899 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QLFSILFSG 9 +LF++ F G Sbjct: 174 ELFNVFFGG 182>NP_054772 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLFSILFS 8 Q+F ILF+ Sbjct: 471 QIFGILFT 478>NP_660204 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLFSILF 7 QLF ILF Sbjct: 279 QLFRILF 285>NP_001020276 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLFSILF 7 QLF ILF Sbjct: 307 QLFRILF 313>NP_997724 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSILFS 8 FSILFS Sbjct: 35 FSILFS 40>NP_115598 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FSILFS 8 FSILFS Sbjct: 678 FSILFS 683>NP_001258671 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLFSILF 7 QLF ILF Sbjct: 218 QLFRILF 224>NP_001258670 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLFSILF 7 QLF ILF Sbjct: 279 QLFRILF 285>NP_071737 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 192 FSLLFEG 198>NP_001883 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QLFSILF 7 QLF ILF Sbjct: 279 QLFRILF 285>NP_878905 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 192 FSLLFEG 198>XP_006714631 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QLFSILFSG 9 +LF++ F G Sbjct: 174 ELFNVFFGG 182>XP_006714630 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QLFSILFSG 9 +LF++ F G Sbjct: 174 ELFNVFFGG 182>XP_005271975 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QLFSILFSG 9 +LF++ F G Sbjct: 174 ELFNVFFGG 182>XP_005271974 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 QLFSILFSG 9 +LF++ F G Sbjct: 174 ELFNVFFGG 182>XP_005265446 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 225 FSLLFEG 231>XP_005265445 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 225 FSLLFEG 231>NP_005469 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LFSILFS 8 LFS+LF+ Sbjct: 10 LFSVLFA 16>NP_001128350 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FSILFSG 9 FS+LF G Sbjct: 192 FSLLFEG 198Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.153 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,288 Number of extensions: 883 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |