Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 390 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001164015 17 2528 NP_003480 17 2528 NP_612642 17 2528 NP_001164014 17 2528 XP_006724117 17 2528 XP_005261123 17 2528 XP_005261122 17 2528 XP_005261120 17 2528 NP_006235 16 5631 NP_932341 16 5631 NP_001159694 16 5631 XP_005252834 16 5631 XP_006725198 16 5631 XP_006725197 16 5631 XP_006725196 16 5631 XP_006725195 16 5631 XP_006725194 16 5631 XP_005274182 16 5631 XP_006718670 16 5631 XP_006718669 16 5631 XP_006718198 16 5631 XP_005252833 16 5631 XP_006718197 16 5631 XP_006718196 16 5631 XP_006718195 16 5631 XP_005252832 16 5631 NP_065862 16 5631 NP_653223 16 7355 NP_443132 16 7355 NP_005050 16 7355 NP_937757 16 7355 NP_937756 16 7355 NP_059509 16 7355 XP_005251598 16 7355 XP_006711227 16 7355 NP_604390 16 7355 NP_008842 16 7355 NP_001128493 15 9605 NP_001128495 15 9605 NP_001128494 15 9605 NP_997320 15 9605 NP_115589 15 9605 NP_705690 15 9605 NP_443186 15 9605 NP_872378 15 9605 NP_919417 15 9605 XP_006723212 15 9605 XP_005255101 15 9605 XP_005253612 15 9605 XP_006712179 15 9605 XP_005264655 15 9605 XP_005264654 15 9605 XP_005264653 15 9605 NP_150296 15 9605>NP_001243398 Length = 1781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 QLAQC MAA Sbjct: 1473 QLAQCSMAA 1481>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 QLAQC MAA Sbjct: 1765 QLAQCSMAA 1773>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 QLAQC MAA Sbjct: 1582 QLAQCSMAA 1590>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 QLAQC MAA Sbjct: 1765 QLAQCSMAA 1773>NP_001164015 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 QLA CG+A Sbjct: 8 QLAACGLA 15>NP_003480 Length = 1158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCGM Sbjct: 634 LAQCGM 639>NP_612642 Length = 255 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 QLA CG+A Sbjct: 8 QLAACGLA 15>NP_001164014 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 QLA CG+A Sbjct: 8 QLAACGLA 15>XP_006724117 Length = 1158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCGM Sbjct: 634 LAQCGM 639>XP_005261123 Length = 1158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCGM Sbjct: 634 LAQCGM 639>XP_005261122 Length = 1158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCGM Sbjct: 634 LAQCGM 639>XP_005261120 Length = 1158 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCGM Sbjct: 634 LAQCGM 639>NP_006235 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QLAQCGM 7 +LAQCG+ Sbjct: 80 KLAQCGV 86>NP_932341 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>NP_001159694 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCG+ Sbjct: 397 LAQCGL 402>XP_005252834 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006725198 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006725197 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006725196 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006725195 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006725194 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_005274182 Length = 966 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCG+ Sbjct: 413 LAQCGL 418>XP_006718670 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QLAQCGM 7 +LAQCG+ Sbjct: 80 KLAQCGV 86>XP_006718669 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QLAQCGM 7 +LAQCG+ Sbjct: 80 KLAQCGV 86>XP_006718198 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_005252833 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006718197 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006718196 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_006718195 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>XP_005252832 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LAQCGMA 8 LA+CG+A Sbjct: 123 LARCGLA 129>NP_065862 Length = 827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCG+ Sbjct: 274 LAQCGL 279>NP_653223 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 +LA CG+A+ Sbjct: 238 KLALCGLAS 246>NP_443132 Length = 3538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQCGMA 8 LAQCG A Sbjct: 2004 LAQCGGA 2010>NP_005050 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 Q+A CGM+ Sbjct: 43 QIAICGMS 50>NP_937757 Length = 3667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQCGMA 8 LAQCG A Sbjct: 2068 LAQCGGA 2074>NP_937756 Length = 3707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LAQCGMA 8 LAQCG A Sbjct: 2108 LAQCGGA 2114>NP_059509 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 LAQCG+ Sbjct: 76 LAQCGV 81>XP_005251598 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 Q+A CGM+ Sbjct: 43 QIAICGMS 50>XP_006711227 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QLAQCGMAA 9 +LA CG+A+ Sbjct: 65 KLALCGLAS 73>NP_604390 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 Q+A CGM+ Sbjct: 43 QIAICGMS 50>NP_008842 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QLAQCGMA 8 Q+A CGM+ Sbjct: 43 QIAICGMS 50>NP_001128493 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>NP_001128495 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>NP_001128494 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LAQCG 6 LAQCG Sbjct: 1874 LAQCG 1878>NP_115589 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>NP_705690 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 CGMAA 9 CGMAA Sbjct: 165 CGMAA 169>NP_443186 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LAQCG 6 LAQCG Sbjct: 28 LAQCG 32>NP_872378 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 QLAQCGM 7 Q A CGM Sbjct: 293 QCADCGM 299>NP_919417 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 CGMAA 9 CGMAA Sbjct: 165 CGMAA 169>XP_006723212 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 QLAQCGM 7 Q A CGM Sbjct: 333 QCADCGM 339>XP_005255101 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 LAQCGM 7 LA CGM Sbjct: 249 LASCGM 254>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 LAQCG 6 LAQCG Sbjct: 1992 LAQCG 1996>XP_006712179 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>XP_005264655 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>XP_005264654 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>XP_005264653 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 LAQCGM 7 +AQCG+ Sbjct: 159 IAQCGL 164>NP_150296 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 LAQCGM 7 LA CGM Sbjct: 249 LASCGM 254Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.123 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 495,583 Number of extensions: 290 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |