Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_056993 17 3301 NP_115495 17 4312 NP_001153514 16 7355 NP_060604 16 7355 NP_848622 16 7355 NP_000867 16 7355 NP_001177087 16 7355 NP_002514 16 7355 NP_659461 16 7355 NP_775871 16 7355 NP_001098990 16 7355 XP_005276925 16 7355 XP_005255898 16 7355 NP_001137157 16 7355 NP_001139 15 9605 NP_665804 15 9605 XP_006714257 15 9605 XP_005263002 15 9605 XP_005262999 15 9605 XP_006714252 15 9605 XP_006714251 15 9605 XP_006714250 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QK ESTTRL Sbjct: 2236 QKKESTTRL 2244>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QK ESTTRL Sbjct: 2228 QKKESTTRL 2236>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QK ESTTRL Sbjct: 2189 QKKESTTRL 2197>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QK ESTTRL Sbjct: 2268 QKKESTTRL 2276>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QK ESTTRL Sbjct: 2281 QKKESTTRL 2289>NP_056993 Length = 2371 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KTESTTRL 9 KTE+TT+L Sbjct: 1026 KTEATTKL 1033>NP_115495 Length = 6306 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+ TT+L Sbjct: 588 QKTQVTTKL 596>NP_001153514 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKTESTTRL 9 +KT TTR+ Sbjct: 215 EKTRDTTRM 223>NP_060604 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKTESTTRL 9 +KT TTR+ Sbjct: 135 EKTRDTTRM 143>NP_848622 Length = 1124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KTESTT 7 KTESTT Sbjct: 497 KTESTT 502>NP_000867 Length = 2491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT S+T+L Sbjct: 2469 QKTVSSTKL 2477>NP_001177087 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+S TR+ Sbjct: 334 QKTKSFTRV 342>NP_002514 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QKTEST 6 QKTEST Sbjct: 196 QKTEST 201>NP_659461 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+S TR+ Sbjct: 305 QKTKSFTRV 313>NP_775871 Length = 8384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QKTESTTR 8 QKT +TTR Sbjct: 7871 QKTGATTR 7878>NP_001098990 Length = 118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKTESTTR 8 Q+TE+T+R Sbjct: 76 QRTETTSR 83>XP_005276925 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+S TR+ Sbjct: 66 QKTKSFTRV 74>XP_005255898 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+S TR+ Sbjct: 66 QKTKSFTRV 74>NP_001137157 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 QKT+S TR+ Sbjct: 305 QKTKSFTRV 313>NP_001139 Length = 3957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2266 KTETTTEI 2273>NP_665804 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKTESTTRL 9 ++TE TTR+ Sbjct: 186 KQTEKTTRV 194>XP_006714257 Length = 4145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2275 KTETTTEI 2282>XP_005263002 Length = 4072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2233 KTETTTEI 2240>XP_005262999 Length = 4147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2277 KTETTTEI 2284>XP_006714252 Length = 4153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2283 KTETTTEI 2290>XP_006714251 Length = 4165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2295 KTETTTEI 2302>XP_006714250 Length = 4190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KTESTTRL 9 KTE+TT + Sbjct: 2320 KTETTTEI 2327Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.103 0.235 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 381,141 Number of extensions: 498 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |