Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 XP_005266703 18 1482 NP_056280 17 3301 NP_001239085 17 3301 XP_005248127 16 5631 XP_005248126 16 5631 XP_005248124 16 5631 XP_005248123 16 5631 XP_005248122 16 5631 XP_005248121 16 5631 XP_005248120 16 5631 XP_006714059 16 5631 XP_005248119 16 5631 XP_005248118 16 5631 XP_005248117 16 5631 XP_005248116 16 5631 XP_005248115 16 5631 XP_005248114 16 5631 NP_005076 16 7355 NP_001230280 16 7355 NP_057202 16 7355 NP_004781 16 7355 NP_695008 16 7355 NP_695010 16 7355 NP_695009 16 7355 NP_006518 16 7355 NP_055796 16 7355 XP_006718456 16 7355 XP_005272276 16 7355 XP_005272275 16 7355 XP_006717355 16 7355 XP_005272274 16 7355 XP_005272273 16 7355 XP_005250069 16 7355 XP_005250068 16 7355 XP_005250067 16 7355 NP_694948 16 7355 NP_001182583 15 9605 NP_115916 15 9605 NP_001182582 15 9605 NP_001076582 15 9605 NP_852150 15 9605 NP_005465 15 9605 NP_001015053 15 9605 NP_005885 15 9605 XP_006721692 15 9605 XP_005256964 15 9605 XP_005256963 15 9605 XP_005256962 15 9605 XP_005256961 15 9605 XP_006720705 15 9605 XP_005245659 15 9605 NP_001123920 15 9605 NP_001094874 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 QKQ SIGKS Sbjct: 2140 QKQPSIGKS 2148>XP_005266703 Length = 1501 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 QKQ SIGKS Sbjct: 1471 QKQPSIGKS 1479>NP_056280 Length = 1508 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQLS GKS Sbjct: 1133 EKQLSEGKS 1141>NP_001239085 Length = 1507 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQLS GKS Sbjct: 1132 EKQLSEGKS 1140>XP_005248127 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248126 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 371 KRLSIGKA 378>XP_005248124 Length = 1467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248123 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248122 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 483 KRLSIGKA 490>XP_005248121 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 555 KRLSIGKA 562>XP_005248120 Length = 1549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 561 KRLSIGKA 568>XP_006714059 Length = 1600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248119 Length = 1601 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248118 Length = 1602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248117 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248116 Length = 1627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248115 Length = 1629 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>XP_005248114 Length = 1630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KQLSIGKS 9 K+LSIGK+ Sbjct: 642 KRLSIGKA 649>NP_005076 Length = 2090 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 205 KQLAVGK 211>NP_001230280 Length = 639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQL +GK+ Sbjct: 157 KKQLQLGKT 165>NP_057202 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQL +GK+ Sbjct: 157 KKQLQLGKT 165>NP_004781 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKQLSIGK 8 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695008 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKQLSIGK 8 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695010 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKQLSIGK 8 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_695009 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QKQLSIGK 8 QK+L++GK Sbjct: 314 QKELTMGK 321>NP_006518 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 QKQ++ GK+ Sbjct: 139 QKQINYGKN 147>NP_055796 Length = 1946 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQL GK+ Sbjct: 1456 QKQLQSGKA 1464>XP_006718456 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 737 KQLTVGK 743>XP_005272276 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272275 Length = 2083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 246 KQLAVGK 252>XP_006717355 Length = 2120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272274 Length = 2121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005272273 Length = 2132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQL++GK Sbjct: 246 KQLAVGK 252>XP_005250069 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQL +GK+ Sbjct: 157 KKQLQLGKT 165>XP_005250068 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQL +GK+ Sbjct: 133 KKQLQLGKT 141>XP_005250067 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 +KQL +GK+ Sbjct: 157 KKQLQLGKT 165>NP_694948 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKQLSIGKS 9 QK+LS+G S Sbjct: 135 QKRLSLGYS 143>NP_001182583 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQ +GK+ Sbjct: 353 QKQTRVGKA 361>NP_115916 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQ +GK+ Sbjct: 382 QKQTRVGKA 390>NP_001182582 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQ +GK+ Sbjct: 362 QKQTRVGKA 370>NP_001076582 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQ +GK+ Sbjct: 362 QKQTRVGKA 370>NP_852150 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKQLSIGKS 9 QKQ +GK+ Sbjct: 362 QKQTRVGKA 370>NP_005465 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 526 QQQLQLGK 533>NP_001015053 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 527 QQQLQLGK 534>NP_005885 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQLSIGKS 9 KQL GKS Sbjct: 283 KQLGCGKS 290>XP_006721692 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 485 QQQLQLGK 492>XP_005256964 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 522 QQQLQLGK 529>XP_005256963 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 526 QQQLQLGK 533>XP_005256962 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 526 QQQLQLGK 533>XP_005256961 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKQLSIGK 8 Q+QL +GK Sbjct: 527 QQQLQLGK 534>XP_006720705 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQLS+G+ Sbjct: 6 KQLSLGR 12>XP_005245659 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KQLSIGKS 9 KQL GKS Sbjct: 283 KQLGCGKS 290>NP_001123920 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQLS+G+ Sbjct: 16 KQLSLGR 22>NP_001094874 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KQLSIGK 8 KQLS+G+ Sbjct: 6 KQLSLGR 12Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.118 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 503,410 Number of extensions: 657 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |