Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 XP_006720035 17 2528 XP_005268376 17 2528 XP_006720034 17 2528 XP_006720033 17 2528 XP_005268375 17 2528 XP_006720032 17 2528 NP_060375 17 2528 NP_620162 17 4312 NP_001271330 17 4312 XP_005264932 17 4312 XP_006713036 17 4312 XP_005264930 17 4312 NP_599023 16 5631 NP_599022 16 5631 NP_001239264 16 5631 NP_599024 16 5631 NP_002934 16 5631 NP_689732 16 5631 NP_116255 16 5631 XP_005254784 16 5631 XP_005254783 16 5631 XP_005254641 16 5631 XP_005246392 16 5631 XP_005246391 16 5631 XP_006712383 16 5631 XP_005246390 16 5631 XP_005246389 16 5631 XP_006712382 16 5631 XP_005246387 16 5631 XP_005246386 16 5631 XP_005246385 16 5631 NP_001273304 16 7355 NP_000878 16 7355 NP_001131140 16 7355 NP_036247 16 7355 NP_001131139 16 7355 NP_740754 15 9605 NP_061336 15 9605 NP_008971 15 9605 NP_004362 15 9605 NP_001091868 15 9605 NP_056147 15 9605 NP_055073 15 9605 NP_653333 15 9605 NP_001107590 15 9605 XP_006723744 15 9605 XP_005260304 15 9605 XP_005258523 15 9605 XP_005258522 15 9605 XP_005258520 15 9605 XP_005258521 15 9605 XP_005258519 15 9605 XP_005258518 15 9605 XP_005258516 15 9605 XP_005256774 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 +KNAVLDRM Sbjct: 606 EKNAVLDRM 614>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 +KNAVLDRM Sbjct: 606 EKNAVLDRM 614>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 +KNAVLDRM Sbjct: 606 EKNAVLDRM 614>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 +KNAVLDRM Sbjct: 606 EKNAVLDRM 614>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 +KNAVLDRM Sbjct: 606 EKNAVLDRM 614>XP_006720035 Length = 411 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>XP_005268376 Length = 543 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>XP_006720034 Length = 613 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>XP_006720033 Length = 646 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>XP_005268375 Length = 655 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>XP_006720032 Length = 677 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>NP_060375 Length = 677 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 QKNAVL+++ Sbjct: 63 QKNAVLNKL 71>NP_620162 Length = 316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QKNAVLD 7 QKNA+LD Sbjct: 44 QKNAMLD 50>NP_001271330 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QKNAVLD 7 QKNA+LD Sbjct: 44 QKNAMLD 50>XP_005264932 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QKNAVLD 7 QKNA+LD Sbjct: 44 QKNAMLD 50>XP_006713036 Length = 295 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QKNAVLD 7 QKNA+LD Sbjct: 44 QKNAMLD 50>XP_005264930 Length = 452 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QKNAVLD 7 QKNA+LD Sbjct: 44 QKNAMLD 50>NP_599023 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKNAVLDR 8 QKN ++DR Sbjct: 112 QKNCLIDR 119>NP_599022 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKNAVLDR 8 QKN ++DR Sbjct: 145 QKNCLIDR 152>NP_001239264 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNAVLDR 8 KN VLDR Sbjct: 126 KNGVLDR 132>NP_599024 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKNAVLDR 8 QKN ++DR Sbjct: 57 QKNCLIDR 64>NP_002934 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKNAVLDR 8 QKN ++DR Sbjct: 137 QKNCLIDR 144>NP_689732 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 175 QENALLDKV 183>NP_116255 Length = 1302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNAVLDR 8 KN VLDR Sbjct: 126 KNGVLDR 132>XP_005254784 Length = 1303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNAVLDR 8 KN VLDR Sbjct: 126 KNGVLDR 132>XP_005254783 Length = 1303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNAVLDR 8 KN VLDR Sbjct: 126 KNGVLDR 132>XP_005254641 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKNAVLDR 8 QKN ++DR Sbjct: 66 QKNCLIDR 73>XP_005246392 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 208 QENALLDKV 216>XP_005246391 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 208 QENALLDKV 216>XP_006712383 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 208 QENALLDKV 216>XP_005246390 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 175 QENALLDKV 183>XP_005246389 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 208 QENALLDKV 216>XP_006712382 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 175 QENALLDKV 183>XP_005246387 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 175 QENALLDKV 183>XP_005246386 Length = 987 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 175 QENALLDKV 183>XP_005246385 Length = 1020 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QKNAVLDRM 9 Q+NA+LD++ Sbjct: 208 QENALLDKV 216>NP_001273304 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QKNAVLD 7 QKN VLD Sbjct: 1015 QKNPVLD 1021>NP_000878 Length = 1163 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 QKNAVLD 7 QKN VLD Sbjct: 1015 QKNPVLD 1021>NP_001131140 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QKNAVLDRM 9 +KN ++DR+ Sbjct: 1111 KKNGIVDRL 1119>NP_036247 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QKNAVLDRM 9 +KN ++DR+ Sbjct: 1111 KKNGIVDRL 1119>NP_001131139 Length = 1982 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QKNAVLDRM 9 +KN ++DR+ Sbjct: 1111 KKNGIVDRL 1119>NP_740754 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNAVLDRM 9 +NAVLD++ Sbjct: 269 ENAVLDQL 276>NP_061336 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KNAVLDRM 9 +NAVLD++ Sbjct: 269 ENAVLDQL 276>NP_008971 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 456 NAIMDKM 462>NP_004362 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVLDRM 9 AVLDRM Sbjct: 427 AVLDRM 432>NP_001091868 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AVLDRM 9 AVLDRM Sbjct: 427 AVLDRM 432>NP_056147 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QKNAVLDRM 9 ++ AVLDR+ Sbjct: 300 EEQAVLDRL 308>NP_055073 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA+LD+M Sbjct: 177 NAMLDKM 183>NP_653333 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 356 NAIMDKM 362>NP_001107590 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QKNAVLDR 8 Q+N LDR Sbjct: 106 QRNVALDR 113>XP_006723744 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA+LD+M Sbjct: 177 NAMLDKM 183>XP_005260304 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA+LD+M Sbjct: 177 NAMLDKM 183>XP_005258523 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 356 NAIMDKM 362>XP_005258522 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 356 NAIMDKM 362>XP_005258520 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 356 NAIMDKM 362>XP_005258521 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 356 NAIMDKM 362>XP_005258519 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 367 NAIMDKM 373>XP_005258518 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 367 NAIMDKM 373>XP_005258516 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NAVLDRM 9 NA++D+M Sbjct: 456 NAIMDKM 462>XP_005256774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QKNAVLDR 8 Q+N LDR Sbjct: 106 QRNVALDR 113Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.128 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,234 Number of extensions: 617 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |