Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_004620 16 7355 NP_004044 16 7355 NP_001243239 16 7355 NP_001271427 16 7355 NP_055720 16 7355 NP_689559 16 7355 NP_001271428 16 7355 NP_056081 16 7355 NP_001247420 16 7355 XP_003960378 16 7355 XP_006723821 16 7355 XP_006723820 16 7355 XP_006723819 16 7355 XP_006721509 16 7355 XP_006721508 16 7355 XP_006721507 16 7355 XP_003960020 16 7355 XP_005246524 16 7355 XP_006712499 16 7355 XP_006712498 16 7355 XP_003403815 16 7355 NP_963844 16 7355 NP_001277238 15 9605 NP_001894 15 9605 NP_001277236 15 9605 XP_006714599 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1626 QKTGNAVRA 1634>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1677 QKTGNAVRA 1685>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1746 QKTGNAVRA 1754>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1695 QKTGNAVRA 1703>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1687 QKTGNAVRA 1695>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1688 QKTGNAVRA 1696>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1756 QKTGNAVRA 1764>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK GNAVRA Sbjct: 1756 QKTGNAVRA 1764>NP_004620 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN RA Sbjct: 257 RKMGNPQRA 265>NP_004044 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GNAVRA 9 GNAVRA Sbjct: 26 GNAVRA 31>NP_001243239 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMGNAVR 8 KMGN+V+ Sbjct: 507 KMGNSVK 513>NP_001271427 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 423 QKITNAMRA 431>NP_055720 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMGNAVR 8 KMGN+V+ Sbjct: 507 KMGNSVK 513>NP_689559 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 419 QKITNAMRA 427>NP_001271428 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 282 QKITNAMRA 290>NP_056081 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN V + Sbjct: 495 EKMGNTVES 503>NP_001247420 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN V + Sbjct: 511 EKMGNTVES 519>XP_003960378 Length = 141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QKMGNAVR 8 Q GNAVR Sbjct: 73 QSRGNAVR 80>XP_006723821 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN V + Sbjct: 248 EKMGNTVES 256>XP_006723820 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN V + Sbjct: 248 EKMGNTVES 256>XP_006723819 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKMGNAVRA 9 +KMGN V + Sbjct: 528 EKMGNTVES 536>XP_006721509 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 386 QKITNAMRA 394>XP_006721508 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 419 QKITNAMRA 427>XP_006721507 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QKMGNAVRA 9 QK+ NA+RA Sbjct: 419 QKITNAMRA 427>XP_003960020 Length = 141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QKMGNAVR 8 Q GNAVR Sbjct: 73 QSRGNAVR 80>XP_005246524 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMGNAVR 8 KMGN+V+ Sbjct: 507 KMGNSVK 513>XP_006712499 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMGNAVR 8 KMGN+V+ Sbjct: 507 KMGNSVK 513>XP_006712498 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMGNAVR 8 KMGN+V+ Sbjct: 507 KMGNSVK 513>XP_003403815 Length = 141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QKMGNAVR 8 Q GNAVR Sbjct: 73 QSRGNAVR 80>NP_963844 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MGNAVRA 9 MGN +RA Sbjct: 1 MGNTIRA 7>NP_001277238 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMGNAVRA 9 K GN VRA Sbjct: 17 KRGNMVRA 24>NP_001894 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMGNAVRA 9 K GN VRA Sbjct: 120 KRGNMVRA 127>NP_001277236 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMGNAVRA 9 K GN VRA Sbjct: 120 KRGNMVRA 127>XP_006714599 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KMGNAVRA 9 K GN VRA Sbjct: 120 KRGNMVRA 127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.120 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,907 Number of extensions: 351 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |