Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 22 79 NP_006452 17 3301 XP_006715715 17 3301 NP_064623 17 4312 NP_057336 17 4312 NP_001035784 17 4312 XP_006718596 17 4312 XP_006712120 17 4312 XP_005264512 17 4312 XP_005264511 17 4312 XP_006712119 17 4312 XP_005264510 17 4312 XP_006712118 17 4312 XP_005264509 17 4312 XP_005264508 17 4312 XP_006712117 17 4312 XP_005264507 17 4312 XP_005264506 17 4312 NP_001087195 16 5631 NP_001078955 16 5631 NP_005401 16 5631 NP_001004471 16 5631 NP_056197 16 7355 NP_001155000 16 7355 NP_075463 16 7355 XP_005261542 16 7355 XP_005267560 16 7355 XP_005267559 16 7355 XP_006719812 16 7355 NP_777592 16 7355 NP_001271230 15 9605 NP_001271231 15 9605 NP_940966 15 9605 NP_061155 15 9605 NP_848599 15 9605 NP_056083 15 9605 NP_001245243 15 9605 XP_006715810 15 9605 XP_006715809 15 9605 XP_005247302 15 9605 XP_006713081 15 9605 XP_006712935 15 9605 XP_006712934 15 9605 XP_006712933 15 9605 XP_005246694 15 9605 NP_852118 15 9605>NP_000312 Length = 928 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QKINQMLCN 9 QKINQM+CN Sbjct: 846 QKINQMVCN 854>NP_006452 Length = 1193 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 +K+NQ LC Sbjct: 1028 EKLNQALC 1035>XP_006715715 Length = 2023 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 +K+NQ LC Sbjct: 2009 RKVNQSLC 2016>NP_064623 Length = 914 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ + LCN Sbjct: 17 QKLMEFLCN 25>NP_057336 Length = 4857 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>NP_001035784 Length = 918 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ + LCN Sbjct: 17 QKLMEFLCN 25>XP_006718596 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ + LCN Sbjct: 17 QKLMEFLCN 25>XP_006712120 Length = 4812 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264512 Length = 4840 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264511 Length = 4847 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_006712119 Length = 4851 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264510 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_006712118 Length = 4864 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264509 Length = 4870 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264508 Length = 4875 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_006712117 Length = 4878 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264507 Length = 4880 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>XP_005264506 Length = 4884 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 K+N LCN Sbjct: 771 KLNSALCN 778>NP_001087195 Length = 411 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INQMLC 8 INQ+LC Sbjct: 312 INQLLC 317>NP_001078955 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INQMLC 8 INQ+LC Sbjct: 282 INQLLC 287>NP_005401 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 INQMLC 8 INQ+LC Sbjct: 282 INQLLC 287>NP_001004471 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 Q+IN LC+ Sbjct: 177 QEINHFLCD 185>NP_056197 Length = 2610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ Q+ CN Sbjct: 1848 QKLLQLSCN 1856>NP_001155000 Length = 860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QKI+ +CN Sbjct: 592 QKISSDICN 600>NP_075463 Length = 3013 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 INQMLCN 9 INQ++C+ Sbjct: 2688 INQLMCD 2694>XP_005261542 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 + +N+MLC Sbjct: 7 KNLNEMLC 14>XP_005267560 Length = 2563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ Q+ CN Sbjct: 1801 QKLLQLSCN 1809>XP_005267559 Length = 2610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QKINQMLCN 9 QK+ Q+ CN Sbjct: 1848 QKLLQLSCN 1856>XP_006719812 Length = 3019 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 INQMLCN 9 INQ++C+ Sbjct: 2688 INQLMCD 2694>NP_777592 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 + +N+MLC Sbjct: 193 KNLNEMLC 200>NP_001271230 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QK+NQ+L Sbjct: 1063 QKLNQVL 1069>NP_001271231 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QK+NQ+L Sbjct: 1062 QKLNQVL 1068>NP_940966 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QKINQ++ Sbjct: 51 QKINQLV 57>NP_061155 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QK+NQ+L Sbjct: 1100 QKLNQVL 1106>NP_848599 Length = 3092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QKINQ++ Sbjct: 51 QKINQLV 57>NP_056083 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 QKINQMLC 8 +++N++LC Sbjct: 2174 EQVNEILC 2181>NP_001245243 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 +KIN++ C Sbjct: 3 KKINKLFC 10>XP_006715810 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QK+NQ+L Sbjct: 1081 QKLNQVL 1087>XP_006715809 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QK+NQ+L Sbjct: 1118 QKLNQVL 1124>XP_005247302 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 QKINQMLC 8 +++N++LC Sbjct: 2179 EQVNEILC 2186>XP_006713081 Length = 3964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QKINQML 7 QKINQ++ Sbjct: 51 QKINQLV 57>XP_006712935 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 KIN+ CN Sbjct: 795 KINEEKCN 802>XP_006712934 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 KIN+ CN Sbjct: 691 KINEEKCN 698>XP_006712933 Length = 1687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 KIN+ CN Sbjct: 795 KINEEKCN 802>XP_005246694 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QKINQMLC 8 +KIN++ C Sbjct: 3 KKINKLFC 10>NP_852118 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 KINQMLCN 9 KIN+ CN Sbjct: 792 KINEEKCN 799Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.130 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,321 Number of extensions: 840 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |